Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3163 ATGTTGCTATTTCTTGTTCGTTGGTGGATTTGTGTGTTTGTGGTGTTAAATTCAGGAGTTGTTAATGGTCAAAATTACCGAACTGTTAGAGATAGAATCCTTCCATTTAGCAAAATTGTTGTCAATTCTTTGGGACATGGCAACTTCTCTACAATTCAATCTGCCATTGATTCTGTCTCTTCCAACAATAAGTATTGGGTTTTAATCAATGTCGAGGCTGGTATTTATAGGGAGAAAGTGACGATTCCAAGTGATAAACCATATATAATACTGAAGGGAAGTGGAAAGATGAGAACGTGGGTTGAATGGGATGACCATAATACAACTGCTCAGAGCCCCACCTTCCAATCCAATGCTGATAATATCGTTGTCAAATCCATCTCTTTTCAGAATACATATAACAATCCAATAAATACAAATCCCAGAGTTCCTGCAGTAGCTGCAATGATAAATGGAGACAAATCTTACTTTTATAGAGTTGGATTCTTCGGATTGCAAGATACTTTGTGGGATAATTATGGAAAACATTATTATAAACTTTGCACTATTCAAGGTGCTGTTGATTTTATCGGCCAGTCATTATTTGAGAGGTGTGGCATAAATGTGATTGGAAGGGCATTAGGAGAAGGATTTGTAGGATATATAACAGCACAAGGGAGAGAAAATCCTAAAGATTCAAATGGATTTGTATTCAAAAATTGTAATGTCTTTGGAGATGGTTCTACTTTTTTGGGAAGACCTTGGAGACCTTATGCCAGAGTTCTTTTCTACAATACAAGTATGGCCAACATTATTCAACCCGCTGGTTGGGATCCATGGGATTCCTCTCAACATGAGGATAACATTATGTTTACAGAGTATGACAATTTTGGACCAGGCTCTGATACGTCCAAACGAGTCAATTGGATTACAAAATTGGATTTAGATACCGTTAATATGATGACAAACACCAGTTTCATAGACTCTGAAGGATGGCTTCAAATTAGCTCTTCATTTTAG 999 0.3684 MLLFLVRWWICVFVVLNSGVVNGQNYRTVRDRILPFSKIVVNSLGHGNFSTIQSAIDSVSSNNKYWVLINVEAGIYREKVTIPSDKPYIILKGSGKMRTWVEWDDHNTTAQSPTFQSNADNIVVKSISFQNTYNNPINTNPRVPAVAAMINGDKSYFYRVGFFGLQDTLWDNYGKHYYKLCTIQGAVDFIGQSLFERCGINVIGRALGEGFVGYITAQGRENPKDSNGFVFKNCNVFGDGSTFLGRPWRPYARVLFYNTSMANIIQPAGWDPWDSSQHEDNIMFTEYDNFGPGSDTSKRVNWITKLDLDTVNMMTNTSFIDSEGWLQISSSF* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3163 332 Pfam Pectinesterase 39 322 IPR000070 GO:0030599|GO:0042545
Ahy20g3163 332 PANTHER PECTINESTERASE 10-RELATED 19 328 - -
Ahy20g3163 332 SUPERFAMILY Pectin lyase-like 39 328 IPR011050 -
Ahy20g3163 332 Gene3D - 36 331 IPR012334 -
Ahy20g3163 332 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 19 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3163 Ahy-Chr20 142323154 142325042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3163 39 279 Carbohydrate Esterase AT2G19150 45.714 2.49e-71 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3163 - - ahf:112786588 631.328