Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3141 ATGAAAATCCCTTGCTGTTCGGTTTGCCAAACGCGGTATAACGAGGAGGAGCGAGTACCGCTGCTGCTCCAATGTGGACACGGATTCTGCAAAGAGTGCCTTTCTAGAATGTTCTCTTCATCGCCCGACGCAACGCTCACATGTCCACGATGCCGCCACGTGTCAACCGTCGGGAACTCCGTACAGGCTCTGCGAAAGAATTACGCTGTTTTGGCACTCATCCACTCCGCCGCCGCCGGAGCTGGAGGCGCCGCTGGTGGCTCGAATTTCGACTGCGACTACACCGACGACGACGACGAGGATGAGGATGGTGGCGGAAGCGGGGACGATGAGGACGATGATGACGAGGAGAAGCGGCGGCGGCGGTGCAGCAGAGCGTCGCAGACGTCGAGCTCCGGCGGGTGCGAGCCGGTGATCGAGGTCGGAGCGCACCCGGACTTGAAGCTGGTGCGGCGGATTGGGGAGGGGAGGAGAGCTGGTGTTGAGATGTGGACGGCGGTGATCGGAGGAAGCGGAGGACGGTGCCGGCACCAGGTGGCGGTTAAGAAGGTGGCGGTGACGGAGGGGATGGATTTGGAGTGGATTCAGGGGAATCTCGAGAATTTGCGGAGAGCTTCGATGTGGTGCAGGAACGTGTGCACTTTCCATGGAGCAATGAAGCATGAAGAGAGCTTGTGCCTTGTGATGGATAGGTGCTATGGATCGGTTCAGTCTGAGATGCAGAGAAATGAGGGCAGGCTCACTTTGGAACAAGTCCTAAGATATGGAGCAGACATTGCAAGAGGGGTTGTTGAGCTTCATGCTGCTGGTGTCGTTTGCATGAATTTAAAACCTTCCAATCTTCTTCTTGATTCAAATGGGCACGCGGTAGTTTCTGATTATGGACTTGCTACAATTTTAAAGAAGCCTTCCTGTTGGAAGGCGCGGCCAGAGTGTGACTCCTCAAAGATCCACTCTTGTATGGAATGTATAATGCTCAGTCCACATTATACAGCACCCGAGGCTTGGGAACCTGGGAAGAAGTCACTAAATATTTTCTGGGATGATGCAATAGGTATATCTCCCGAGTCAGATGCATGGAGTTTTGGTTGTACATTGGTTGAGATGTGCACGGGTGCCATTCCTTGGGCTGGCTTAAGTGCAGAAGAAATTTATCGTTCAGTTGTTAAAGCCAAGAGACTTCCTCCACAGTATGCCAGTGTGGTTGGTGGTGGAATTCCAAGGGAATTGTGGAAGATGATTGGAGAGTGCTTGCAATTCAAGCCATCTAAAAGGCCTACATTTAATGCAATGTTAGCAATATTTCTCCGCCATTTGCAGGAAATACCGCGCAGCCCTCCTGCAAGCCCTGATAATGACTTTGTCAAACGCTCTGTGTCTAATGTTACTGAACCAACCCCAGCCCCTGAATTAGATGTCCCTCAAGAAATGCCAAACCCAAACCATCTTCACCGCTTTGTGTCTGAAGGGGATGCCACAGGAGTTAGAGATCTTCTTGCGAAGGCTGCATCAGAAAATGGCAGCGATTACATATCTTCTCTACTGGAATCTCAAAATGTTGATGGGCAAACAGCTCTTCACTTAGCTTGTAGGCGTGGAAGTGCAGAGCTTGTTGAGGCCATTTTGGAGTATAAAGAGGCTAATGTTGATGTCTTGGACAAAGATGGAGATCCTCCTCTTGTTTTTGCTTTAGCAGCTGGCTCTCCAGATTGTGTTCGTTGCCTCATCAAAAGAAATGCTAACGTGACATCAAGACTGAGGGATGGCTTGGGCCCATCTGTCGCTCATGTTTGTGCTTATCATGGACAACCAGATTGTATGCGAGAACTACTATTAGCTGGAGCTGATCCTAATGCAGTGGATGATGAAGGAGAATCTGTATTGCATAGGGCAGTTGCTAAGAAGTATACAGACTGTGCCATTGTAATATTAGAAAATGGAGGCTGTAGATCAATGGCCATTATGAACTCAAAGAACCTGACACCGCTACACTTGTGTGTGGCAACATGGAATGTTGCTGTTGTGAAGAGATGGGTGGAAGTTGCAACTTCAGATGAGATTGCTGAAGCAATTGACATACCGAGCCCAATTGGAACTGCCTTGTGCATGGCAGCAGCTTCTAAGAAAGATCATGAAAGCGAAGGGAGAGAATTGGTGCGGATACTGCTTGCGGCAGGAGCGGATCCGTCTGCTCAAGATTCACAGAATGGGAGGACAGCTTTGCATACAGCTGCTATGACAAATGATGTGGACTTGGTCAAGGTCATTCTTGCTGCTGGAGTTGATGTGAACATTTGCAATATACACAACAGTATACCTCTTCACTTGGCATTAGCTAGGGGTGCAAAGGCATCTGTTGGACTGCTTCTAGCTGCTGGGGCAGATTACAATTTGCAGGATGATGATGGTGACAATGCTTTCCATATAGCAGCAGAGACAGCCAAAATGATACGTGAAAATCTTGACTGGCTCATTGTTATGCTAAGGAATTCCGATGCTGATATTGAGGTCAGAAACCACAGTGGCAGGACACTACGTGACATCTTGGAGGCCCTTCCCCGAGAATGGATATCTGAAGATCTGATGGAGGCACTCATGAATAGAGGAGTTCATCTTTCTCCTACAATATTTGAAGTGGGAGACTGGGTGAAATTTAAAAGAACTGTCACAGCTCCTACCTATGGGTGGCAAGGTGCTAGACCAAAGAGTGTTGGATTTGTGCAAAGTATTCAAGATCGTGATAATCTCATTGTTTCATTTTGCTCTGGAGAAGTTCATGTTTTGGCAAATGAAGTTGTAAAACTCATTCCATTAGACCGAGGGCAACATGTACAGTTGAAAGAAGATGTGAAAGAGCCCAGGTTTGGTTGGCGTGGGCAGTCACGTGACAGCATTGGAACAGTGTTATGTGTTGATGATGATGGAATTCTCCGTGTTGGGTTCCCTGGAGCATCAAGGGGATGGAAAGCTGACCCTGCAGAGATGGAACGGGTTGAGGAATTCAAGGTTGGAGACTGGGTTCGGATTCGTCCTACTCTTACATCAGCTAAACATGGATTAGGATCCGTTACACCTGGAAGCATTGGCATTGTATATTGTATCAGACCAGACAGTAGTCTATTAATAGAACTCAGCTATCTTCCAAATCCATGGCATTGTGAACCAGAGGAGGTGGAGCATGTTGCTCCTTTTAGGATTGGTGATCGCGTCTGTGTGAAGCGTTCTGTTGCAGAACCTAGATATGCTTGGGGTGGTGAGACACATCATAGTGTTGGAAGGATAAGCGAGATTGAGAATGATGGTCTCCTAATAATTGAAATACCAAACCGACCCATACCATGGCAGGCTGATCCATCTGATATGGAGAAGGTGGAAGATTTCAAGGTTGGAGATTGGGTCAGAGTGAAAGCATCAGTTCCTGCTCCAAAGTATGGGTGGGAGGATATTAACAGGAACAGTATTGGGGTAATCCATAGCTTGGAGGAAGATGGTGATATGGGTGTTGCCTTTTGCTTCAGAAGCAAGCCTTTTTCTTGTTCAGTAACTGATGTGGAGAAAGTTCCTCCTTTTGAGGTGGGACAAGAAATTCACGTGATGCCATCTGTTTCTCAGCCACGACTTGGATGGTCAAATGAATCACCAGCTACTGTTGGGAAAATAGCAAGAATTGACATGGATGGTGCTCTTAATTTGAAAGTCACTGGTAGGCAAAGCTTGTGGAAAGTTTCTCCTGGAGATGCAGAACGACTTCCTGGATTTGAAGTTGGGGATTGGGTACGCTCTAAACCAAGCTTGGGGAATAGACCAAGTTATGACTGGAATACTGTTGGAAGGGAAAGTTTAGCTGTTGTGCATAGTGTACAGGATTCTGGATACTTGGAGTTGGCTTGTTGTTTCCGTAAAGGGAAGTGGATTGCTCATTACACAGATGTTGAAAAGGTTCCCATCTTCAAAATTGGGCAATATGTTAGATTTCGAAATGGTCTGGTTGAACCAAGGTGGGGTTGGAGAGGAGCTCAGCCTGAATCTCAGGGTGTTATAACCAGCATTCACGCTGATGGCGAAGTTAGGGTTGTTTTCTTTGGCTTGTCAGCATTATGGAGAGGAGATCCTTCAGATCTACAGATTGAACCAATGTTCGAAGTTGGAGAATGGGTGAGGTTGAAGGATAATGCAAATAGTTGGAAATCGATTGCACCGGGTAGTATTGGTGTTGTACAAGGAATAGGGTATGAAGAAGACGACTCAGACAGAAGCACTTATGTTGGCTTTTGTGGGGAGCAAGAAAAGTGGGTAGGACCAACCTCCCATCTCGAAAGAGTTGACAAACTCTTTGTTGGACAGAAAGTTAGAGTTAAGCAATGTATAAAGCAACCAAGATTTGGTTGGTCAGGGCACACCCATGCTAGTATTGGAACCATACAAGCAATCGATGCCGATGGAAAGCTCCGAATATACACTCCAGCCGGATCGAAGACATGGATGCTGGACCCATCAGAAGTGGAGGTGGTGGAAGAGAGGGAGCTTCGTATCGGAGACTGGGTAAAAGTTAAAGCGTCAGTTTCAACCCCAATCCACCAGTGGGGGGAGGTGAGTCACTCGAGCATTGGAGTGGTGCACCGGATGGAAGATGGAGATCTGTGGGTGGCATTCTGCTTTATGGAGAGACTCTGGCTTTGCAAGGCATGGGAAATGGAAAGGGTTAGACCATTCAAAGTGGGGGACAAGGTAAAAATTAGAGATGGACTCGTGGCACCGCGCTGGGGATGGGGAATGGAAACGCATGCAAGCAAGGGACAGGTGGTAGGAGTAGACGCAAACGGCAAACTGAGAATAAAGTTCCGGTGGAGGGAAGGTAGGCCTTGGATTGGGGACCCTGCTGATGTTGCCCTTGATGGAAACTAA 4905 0.4767 MKIPCCSVCQTRYNEEERVPLLLQCGHGFCKECLSRMFSSSPDATLTCPRCRHVSTVGNSVQALRKNYAVLALIHSAAAGAGGAAGGSNFDCDYTDDDDEDEDGGGSGDDEDDDDEEKRRRRCSRASQTSSSGGCEPVIEVGAHPDLKLVRRIGEGRRAGVEMWTAVIGGSGGRCRHQVAVKKVAVTEGMDLEWIQGNLENLRRASMWCRNVCTFHGAMKHEESLCLVMDRCYGSVQSEMQRNEGRLTLEQVLRYGADIARGVVELHAAGVVCMNLKPSNLLLDSNGHAVVSDYGLATILKKPSCWKARPECDSSKIHSCMECIMLSPHYTAPEAWEPGKKSLNIFWDDAIGISPESDAWSFGCTLVEMCTGAIPWAGLSAEEIYRSVVKAKRLPPQYASVVGGGIPRELWKMIGECLQFKPSKRPTFNAMLAIFLRHLQEIPRSPPASPDNDFVKRSVSNVTEPTPAPELDVPQEMPNPNHLHRFVSEGDATGVRDLLAKAASENGSDYISSLLESQNVDGQTALHLACRRGSAELVEAILEYKEANVDVLDKDGDPPLVFALAAGSPDCVRCLIKRNANVTSRLRDGLGPSVAHVCAYHGQPDCMRELLLAGADPNAVDDEGESVLHRAVAKKYTDCAIVILENGGCRSMAIMNSKNLTPLHLCVATWNVAVVKRWVEVATSDEIAEAIDIPSPIGTALCMAAASKKDHESEGRELVRILLAAGADPSAQDSQNGRTALHTAAMTNDVDLVKVILAAGVDVNICNIHNSIPLHLALARGAKASVGLLLAAGADYNLQDDDGDNAFHIAAETAKMIRENLDWLIVMLRNSDADIEVRNHSGRTLRDILEALPREWISEDLMEALMNRGVHLSPTIFEVGDWVKFKRTVTAPTYGWQGARPKSVGFVQSIQDRDNLIVSFCSGEVHVLANEVVKLIPLDRGQHVQLKEDVKEPRFGWRGQSRDSIGTVLCVDDDGILRVGFPGASRGWKADPAEMERVEEFKVGDWVRIRPTLTSAKHGLGSVTPGSIGIVYCIRPDSSLLIELSYLPNPWHCEPEEVEHVAPFRIGDRVCVKRSVAEPRYAWGGETHHSVGRISEIENDGLLIIEIPNRPIPWQADPSDMEKVEDFKVGDWVRVKASVPAPKYGWEDINRNSIGVIHSLEEDGDMGVAFCFRSKPFSCSVTDVEKVPPFEVGQEIHVMPSVSQPRLGWSNESPATVGKIARIDMDGALNLKVTGRQSLWKVSPGDAERLPGFEVGDWVRSKPSLGNRPSYDWNTVGRESLAVVHSVQDSGYLELACCFRKGKWIAHYTDVEKVPIFKIGQYVRFRNGLVEPRWGWRGAQPESQGVITSIHADGEVRVVFFGLSALWRGDPSDLQIEPMFEVGEWVRLKDNANSWKSIAPGSIGVVQGIGYEEDDSDRSTYVGFCGEQEKWVGPTSHLERVDKLFVGQKVRVKQCIKQPRFGWSGHTHASIGTIQAIDADGKLRIYTPAGSKTWMLDPSEVEVVEERELRIGDWVKVKASVSTPIHQWGEVSHSSIGVVHRMEDGDLWVAFCFMERLWLCKAWEMERVRPFKVGDKVKIRDGLVAPRWGWGMETHASKGQVVGVDANGKLRIKFRWREGRPWIGDPADVALDGN* 1635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3141 1634 CDD RING-HC_ScPSH1_like 5 52 - -
Ahy20g3141 1634 Pfam RING-type zinc-finger 6 49 IPR027370 -
Ahy20g3141 1634 SUPERFAMILY RING/U-box 5 58 - -
Ahy20g3141 1634 Gene3D - 478 589 IPR036770 -
Ahy20g3141 1634 MobiDBLite consensus disorder prediction 92 113 - -
Ahy20g3141 1634 Pfam Ankyrin repeats (3 copies) 715 800 IPR002110 GO:0005515
Ahy20g3141 1634 Pfam Ankyrin repeats (3 copies) 500 584 IPR002110 GO:0005515
Ahy20g3141 1634 ProSiteProfiles Ankyrin repeat profile. 555 587 IPR002110 GO:0005515
Ahy20g3141 1634 ProSiteProfiles Ankyrin repeat region circular profile. 521 543 - -
Ahy20g3141 1634 Pfam Protein kinase domain 174 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g3141 1634 Gene3D Transferase(Phosphotransferase) domain 1 143 456 - -
Ahy20g3141 1634 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 2 1632 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Ahy20g3141 1634 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Ahy20g3141 1634 ProSiteProfiles Ankyrin repeat region circular profile. 736 765 - -
Ahy20g3141 1634 Pfam Ankyrin repeats (many copies) 593 642 IPR002110 GO:0005515
Ahy20g3141 1634 Gene3D - 590 735 IPR036770 -
Ahy20g3141 1634 PRINTS Ankyrin repeat signature 522 537 IPR002110 GO:0005515
Ahy20g3141 1634 PRINTS Ankyrin repeat signature 718 732 IPR002110 GO:0005515
Ahy20g3141 1634 ProSiteProfiles Ankyrin repeat profile. 736 768 IPR002110 GO:0005515
Ahy20g3141 1634 ProSiteProfiles Protein kinase domain profile. 147 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g3141 1634 SMART ring_2 6 51 IPR001841 -
Ahy20g3141 1634 Gene3D - 736 869 IPR036770 -
Ahy20g3141 1634 SUPERFAMILY Protein kinase-like (PK-like) 144 473 IPR011009 -
Ahy20g3141 1634 MobiDBLite consensus disorder prediction 92 139 - -
Ahy20g3141 1634 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 81 IPR013083 -
Ahy20g3141 1634 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
Ahy20g3141 1634 ProSiteProfiles Ankyrin repeat profile. 521 554 IPR002110 GO:0005515
Ahy20g3141 1634 ProSiteProfiles Ankyrin repeat region circular profile. 769 801 - -
Ahy20g3141 1634 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG-LIKE 2 1632 - -
Ahy20g3141 1634 SMART ANK_2a 802 837 IPR002110 GO:0005515
Ahy20g3141 1634 SMART ANK_2a 623 654 IPR002110 GO:0005515
Ahy20g3141 1634 SMART ANK_2a 590 619 IPR002110 GO:0005515
Ahy20g3141 1634 SMART ANK_2a 769 798 IPR002110 GO:0005515
Ahy20g3141 1634 SMART ANK_2a 658 689 IPR002110 GO:0005515
Ahy20g3141 1634 SMART ANK_2a 696 731 IPR002110 GO:0005515
Ahy20g3141 1634 SMART ANK_2a 736 765 IPR002110 GO:0005515
Ahy20g3141 1634 SMART ANK_2a 521 551 IPR002110 GO:0005515
Ahy20g3141 1634 SMART ANK_2a 555 584 IPR002110 GO:0005515
Ahy20g3141 1634 ProSiteProfiles Ankyrin repeat profile. 590 622 IPR002110 GO:0005515
Ahy20g3141 1634 ProSiteProfiles Ankyrin repeat profile. 769 801 IPR002110 GO:0005515
Ahy20g3141 1634 SUPERFAMILY Ankyrin repeat 502 814 IPR036770 -
Ahy20g3141 1634 Pfam Mind bomb SH3 repeat domain 877 995 IPR040847 -
Ahy20g3141 1634 Pfam Mind bomb SH3 repeat domain 1127 1245 IPR040847 -
Ahy20g3141 1634 Pfam Mind bomb SH3 repeat domain 1057 1121 IPR040847 -
Ahy20g3141 1634 Pfam Mind bomb SH3 repeat domain 1253 1374 IPR040847 -
Ahy20g3141 1634 Pfam Mind bomb SH3 repeat domain 1380 1501 IPR040847 -
Ahy20g3141 1634 Pfam Mind bomb SH3 repeat domain 1510 1629 IPR040847 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3141 Ahy-Chr20 142067613 142079651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3141 399 587 MAP Kinase Kinase Kinase AT2G31800 29.146 6.92e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Ahy20g3141 Pkinase 1.50E-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3141 K16279 - gmx:100777576 2979.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3141 20 142067613 142079651 Ahy20g3141 20 142067613 142079651 ECH