Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3138 ATGGCTTCCAACGGTAAGCATCACGAACAAGAAGAAGAGCTTTTCAAACGAATCGAAGACGAAGAAGAAGAAGAAGATTATGAAGAAGAAGAAGACGGCGAAGAAGGATGGGACGACTGGGAAGGAGACGACGGTGATCCACAATCGGAATTGCTCTGCCTCTTCTGTGATTCTCGCTACGCTTCTTGCGATTCCCTTTTTGCACATTGCGCTTCCATTCACCACTTCGATTTCCATGCCACTCGAAAAGCTCTTACCTTGGATTTCTATTCCTCCTTCAAGCTTATTAACTATATCCGCTCTCAGGTGGCAGATAACAAATGTTGGAGCTGTGGATCGACATGTCAGTCCAACCAAGACTTGCTGAATCATCTGCATGATGCAATTGACTTAAGTGATATAAAGATTAAGTGGGATGACGATAGATATTTAAAACCTTTTATGCAAGATGATTCACTGTTGTACAGTTTTGTTGATTATGAAGATGGGGAAGATGAGCAAATTCCACCAATGGATGAAGATCTTATGATGGATTTGAAGAACTCTATAGACTCTCTTGATTTGAAAAATGTGGTAGTTACTGATGGTGTACATGATACGAGTAGCAGCCAGAAGGTTGCTTCTGTTCCTAATGATCATTTGAACCAGGCTAGTTCTTCAGACAAGGAACTTGTTAATGGCAAGAACTCTAGAGCATATGTGCCTTCAATTGATGAGGCTAGAGAAGAAGGGCTCTTGTTGGCCAAATCTCAAAATCACTTTGAAAAGCAGATTAAGATGGTTAATGAAAGTTATTTTGGGTCTTATAGCTCATACGGCATCCACCGTGAGATGTTAAGTGATAAGGTGAGAATGGATGCTTATGGCCAAGCAATTTTGAAAAATCCCTCTCTCCTAAATGGTGCTGTGGTTATGGATGTAGGTTGTGGAACTGGCATCCTGAGCCTATTTGCAGCTCAAGCAGGGGCATCACGGGTCATAGCAGTTGAGGCTAGTACCAAGATGGCAGCAGTAGCATCTCAGGTTGCAAAAGACAACGGTCTCTTGCTGGATAAAAGCCAGTGTGGTGTGAATGGCCATCAAAAGGGAGTGGTAGAAGTGATTCATGGTATGGTTGAAGAAATTGACAAAAATGTTGGAATTAAACCTCACAGTGTTGATATATTGTTAAGTGAATGGATGGGATATTGCCTGCTATACGAATCCATGCTTGATTCTGTGCTCTATGCACGCGACCGGTGGTTGAAGACTGGAGGTGCCATTCTTCCTGACACAGCAACTATTTTTGTCGCAGGATTCGGAAAAGGTGGCACAAGTCTTCCATTTTGGGAAAACGTGTGTGAATTTGACATGTCTTTCATTGGGAAGGAACTTGTCAAAGATGCTGCCCAAATTCCTATAGTCGATGTTGTGGACTCTCAAGATTTAGTTACCACTTCTGCGGTTCTTCAGACCTTTGATTTGGCAACCATGAAGCCTAATGATGTTAATTTCACTGCAACTGCTACTTTGGAACCAAAATCAAGAGTTTTGGAATATGGAGAAATGCGTGTAGATTCTGAAACATGCTGCCGGTGTTATGGAGTTGTATTGTGGTTTGAAACCAGATTTACAAGCAGATTCTGCCGTGAAGCGCCAACTGTGTTATCAACATCTCCTTACACACCAAAAACACATTGGTCACAAACAATCTTAACCTTTAAGGAACCCATTGAGATTGGATTTCAGAAAGGAAACAATGGTGATCTGGCAGCAATCGGCACTGAGGACTTTCCTGCTGCAAAGGTTGATGTGCGTGTCAGCATTGTACGTTCCACAGAGCATCGCAGTATTGATATTTCATTAGAAGTTGTCGGTGTTAGTCCTGATGGCCGGAGACGCAGTTGGCCGGCTCAATTTTTTTCTTTGCAGTAG 1914 0.4248 MASNGKHHEQEEELFKRIEDEEEEEDYEEEEDGEEGWDDWEGDDGDPQSELLCLFCDSRYASCDSLFAHCASIHHFDFHATRKALTLDFYSSFKLINYIRSQVADNKCWSCGSTCQSNQDLLNHLHDAIDLSDIKIKWDDDRYLKPFMQDDSLLYSFVDYEDGEDEQIPPMDEDLMMDLKNSIDSLDLKNVVVTDGVHDTSSSQKVASVPNDHLNQASSSDKELVNGKNSRAYVPSIDEAREEGLLLAKSQNHFEKQIKMVNESYFGSYSSYGIHREMLSDKVRMDAYGQAILKNPSLLNGAVVMDVGCGTGILSLFAAQAGASRVIAVEASTKMAAVASQVAKDNGLLLDKSQCGVNGHQKGVVEVIHGMVEEIDKNVGIKPHSVDILLSEWMGYCLLYESMLDSVLYARDRWLKTGGAILPDTATIFVAGFGKGGTSLPFWENVCEFDMSFIGKELVKDAAQIPIVDVVDSQDLVTTSAVLQTFDLATMKPNDVNFTATATLEPKSRVLEYGEMRVDSETCCRCYGVVLWFETRFTSRFCREAPTVLSTSPYTPKTHWSQTILTFKEPIEIGFQKGNNGDLAAIGTEDFPAAKVDVRVSIVRSTEHRSIDISLEVVGVSPDGRRRSWPAQFFSLQ* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3138 637 CDD AdoMet_MTases 304 422 - -
Ahy20g3138 637 SUPERFAMILY beta-beta-alpha zinc fingers 32 166 IPR036236 -
Ahy20g3138 637 MobiDBLite consensus disorder prediction 16 42 - -
Ahy20g3138 637 Pfam Methyltransferase domain 304 419 IPR041698 -
Ahy20g3138 637 MobiDBLite consensus disorder prediction 1 15 - -
Ahy20g3138 637 MobiDBLite consensus disorder prediction 1 42 - -
Ahy20g3138 637 Gene3D - 425 628 - -
Ahy20g3138 637 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 268 573 IPR029063 -
Ahy20g3138 637 Gene3D Vaccinia Virus protein VP39 254 423 IPR029063 -
Ahy20g3138 637 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 25 635 IPR025799 GO:0016274|GO:0018216
Ahy20g3138 637 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 262 594 IPR025799 GO:0016274|GO:0018216
Ahy20g3138 637 Coils Coil 11 31 - -
Ahy20g3138 637 Pfam C2H2 type zinc-finger (2 copies) 53 127 IPR041661 -
Ahy20g3138 637 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED 25 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3138 Ahy-Chr20 142026600 142030846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3138 21 636 C2H2 Transcription Factor Family AT3G12270 55.643 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3138 K11436 - gmx:100778113 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3138 20 142026600 142030846 Ahy20g3138 20 142026600 142030846 ECH