Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3135 ATGACTCCTCATCGTGATTGGTTTTGTACATATGAACCTGTCTTGGAAGGATCTGTGTTTATGGGAAACGATCATGCCTTAGAAATTGTTGGAATGAGTATTCAACGACAATTCACAGTTGCATATACGCCTCAGCAAAATGGTGTAGCAAAGCGAATGAATAGGACTCTCCTAGAAAGAGCACGAGCTATGTTGCAAACTGCAGGTTTAGCTAAGTCTTTTTGGGCAGAAGCTGTTAAAACCGCCTGTTATGTGATAAATCGGTCACCATCAACTGCAATTGGGTTAAAGACACCAATGGAGATGTGGCAAGGTAAGCCACCTAATTATTCTTCTTTACATATATTTGGTTGTCCTGTGTACGTGATGTACAATTCCCAGAAAAGAACAAAGCTAGATCCAAAGTCTAGAAAATGTATATTCTTGGGTTATACTGACGGAGTTAAGGGGTATCGCCTGTGGGATCCCACTGCCCGCAAGCTTGTAATTCAAGCTGTGGTGGTGCTTTTGCTGGCTTTGTTATGTGGAGGCTCAGAACGAGAAGCCAAGGCCTTACTTAGGTGGAAAGAAACCCTCCCAGCCCAACCAATTCTTGATTCATGGGCTTTTCAAGCTCAAACTCAAAGCCCGTGTTCATGGAGAGGGATCACTTGTGATTCTCAAGGCAGTGTGGTTGTCATAAACTTAGCATACACCGGACTTACAGTCTACTTTCTTGTCCTTGCAGGTACCCTTGAAAACTTAGACTTCACTGCTTTTCCCAACCTCCTACGACTTGATCTCAAAACAAATAATCTTAGAGGCACCATACCCCAAAACATTGGGATACTCTCAAAACTTCAATTCCTTGACCTTTCCACCAATTCTCTCAATGGCACTTTACCTCTTTCTATTGCAAATCTCACCAAAGTCTATGAGCTTGATGTGTCAAGAAATAACATAACAGGAACACTAGACCCTCGCTTATTTCCTGATGGAACCAATGAGCCAAGAACTGGCCTCATTAGCATCAGGAATTTCTTGTGTGAAACAACCCTTTTAGGTGGAAAAATTCCAAATGAAATAGGCAACATAAAAAACTTGACATTGCTAGCTTTAGATGATAACAACTTTTATGGGCCTATACCTCCATCTCTAGGAAATTGCACACATTTAACTGTTCTTAGAGTGAATCAAAACCATTTCTCAGGTACAATACCTTCTAGTATTGGCAAGTTAACAAATCTAACAGACTTGCGGTTTCAAATCAACAACTTAACCGGCACGGTGCCACGAGAATTCGGAAACTTGTCTTCATTAGTTGTACTTCATCTGGCTGAAAACAACTTTGTTGGAGAATTGCCACCTCAAGTGTGCAAAGGTGGAAAGCTTGTCAACTTCAGTGCAGCACACAATAGTTTCACCGGTCCAATCCCAAGAAGCCTTAGAAACTGCCCAACATTGCATCGAGTTCGAATCGAGTACAATCAGTTGACAGGCTATGCAGATCAAGATTTTGGAGTGTATCCGAACCTCACTTACATTGATTTCAGTTACAACAGGATTCGAGGCCGGTTATCTGCGAAATGGGGTGCCTGCAAGAACTTGCAACTACTTAAAATGGCTGGCAATTCCATAAGAGGCTTTATTCCAGAAGAGATTTTTCAACTGAAGCAGTTAGAAAGTCTTGACCTGTCCTATAATCAAATCTCAGGGAAGATTCCTTCACAAATTGAAAATGCAAGTCGCTTGTATGAATTGAAGTTGGGTGGCAACAAACTTACTGGTATGACACCAGAAGAAATTGGAAAGCTTTCTAATTTGGTGAACTTAGACTTGTCCAAGAACATGTTGTTTGGACCAATCCCAAATCAGATAGGGGATTGCACCAAGTTGCTGAGTTTAAATTTGAGCAACAATCACTTGAATGGCACAATCCCTTACCAAATAGGAAATCTTGCATCCTTGCAAGAATTTTTGGACCTGAGTTACAATTCATTTTCAGGGGAAATTCCTGCTGATCTTGGTAAGCTTGTGAATTTGGTAAGCTTGAATCTCTCTCACAACAATCTCTCCGGTCGAATCCCCAAGTCCCTTGGTGAAATGTTGAGCTTGTTAACCATCAACCTCTCTTACAATCATCTGGAAGGCCCTGTGCCTAGAAATGGCATATTCAACTCTTCACTTCTTCCAATGGATTTGAGAAACAACAAAGGTTTATGTGGCAATATCCAAGGTTTGCAACATTGTGAAGACTCAGTCACTGAACCTGTTGATGGAAGTAGTAAAAGAAATGAAATAGTAATACTTTCTGCTGTTACATTGGGAGGTATTTTGTTTCTTTCATTGGTGTTAGTTGGGATTTTGTGCTTCAAGAAAAAGCCAAAATCAACAGTTTCAAAACAAAACTTTTCAGCAAGCATGAGAGAAAATCAAAATCTGTTTTCAATTTGGTCATTCGATGGCAAAATTGTCTACAGAGATATAATTGAAGCTACCAACAACTTTGACAGCCGTTGCTGCGTCGGCGAGGGAGCGATCGGGAGAGTTTACAAGGCAGTTATCAAAGGAGGCCAACAAGAAGAAGTATTTGCTGTGAAAAAGTTGAAATGTGAATCAGAAAGCTTAGATGTTGAGAGTATAAAATCCTTCCAGAGCGAAGTGGAAGCCATGAGAGAAACGCGCCATAGAAACATTGTGAAACTCTATGGATTCTGCTCTAACAAGACACACACATTCTTGATCTATGAGTATTTGGATCGAGGGAACTTAGCTGAGATGCTTGGAAATGATATCAAAGCATTGGAACTAGATTGGCCTAAGAGGGTGAACATTATCAAAGGCGTTGCGCATGCTTTGTCCTATATGCATCATGATCACACTCCTCCATTGATTCATAGAGACATATCGAGCAAGAACATTTTGCTGTCCTCCAATCTTGAAGCTCGTGTCTCCGATTTCGGCACTGCTAGGTTCTTGAAGCCAGATTCATCGATTTGGACGTCGTTTGCAGGCACATATGGCTATGCTGCTCCAGAACTCGCTTACACGATGTTGGTGACTGAGAAATTGGATGTGTTCAGCTTTGGCGTTTTGGCCTTAGAAGTTATTTCAGGAAAGCACCCCGGTGATGTTGTTCTTCACATAAAAGCTTCTAGTCAATCAAGTATAAACATGATTGAAGTTTTAGACCCACGCCTCTCACATCCAACCAATGAACATATTCTGAAAGAGTTGACCTCGATTGCAAATGTAAGTCTTTCGTGTTTGCAGACAAGCCCTCAATCTCGGCCATCCATGCGAAGCATTGCTCGACTGCTTGAAATAGAAGCTGCAGACAACTATTGA 3327 0.4124 MTPHRDWFCTYEPVLEGSVFMGNDHALEIVGMSIQRQFTVAYTPQQNGVAKRMNRTLLERARAMLQTAGLAKSFWAEAVKTACYVINRSPSTAIGLKTPMEMWQGKPPNYSSLHIFGCPVYVMYNSQKRTKLDPKSRKCIFLGYTDGVKGYRLWDPTARKLVIQAVVVLLLALLCGGSEREAKALLRWKETLPAQPILDSWAFQAQTQSPCSWRGITCDSQGSVVVINLAYTGLTVYFLVLAGTLENLDFTAFPNLLRLDLKTNNLRGTIPQNIGILSKLQFLDLSTNSLNGTLPLSIANLTKVYELDVSRNNITGTLDPRLFPDGTNEPRTGLISIRNFLCETTLLGGKIPNEIGNIKNLTLLALDDNNFYGPIPPSLGNCTHLTVLRVNQNHFSGTIPSSIGKLTNLTDLRFQINNLTGTVPREFGNLSSLVVLHLAENNFVGELPPQVCKGGKLVNFSAAHNSFTGPIPRSLRNCPTLHRVRIEYNQLTGYADQDFGVYPNLTYIDFSYNRIRGRLSAKWGACKNLQLLKMAGNSIRGFIPEEIFQLKQLESLDLSYNQISGKIPSQIENASRLYELKLGGNKLTGMTPEEIGKLSNLVNLDLSKNMLFGPIPNQIGDCTKLLSLNLSNNHLNGTIPYQIGNLASLQEFLDLSYNSFSGEIPADLGKLVNLVSLNLSHNNLSGRIPKSLGEMLSLLTINLSYNHLEGPVPRNGIFNSSLLPMDLRNNKGLCGNIQGLQHCEDSVTEPVDGSSKRNEIVILSAVTLGGILFLSLVLVGILCFKKKPKSTVSKQNFSASMRENQNLFSIWSFDGKIVYRDIIEATNNFDSRCCVGEGAIGRVYKAVIKGGQQEEVFAVKKLKCESESLDVESIKSFQSEVEAMRETRHRNIVKLYGFCSNKTHTFLIYEYLDRGNLAEMLGNDIKALELDWPKRVNIIKGVAHALSYMHHDHTPPLIHRDISSKNILLSSNLEARVSDFGTARFLKPDSSIWTSFAGTYGYAAPELAYTMLVTEKLDVFSFGVLALEVISGKHPGDVVLHIKASSQSSINMIEVLDPRLSHPTNEHILKELTSIANVSLSCLQTSPQSRPSMRSIARLLEIEAADNY* 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3135 1108 Gene3D Ribonuclease Inhibitor 177 328 IPR032675 -
Ahy20g3135 1108 Gene3D Ribonuclease Inhibitor 402 498 IPR032675 -
Ahy20g3135 1108 ProSitePatterns Tyrosine protein kinases specific active-site signature. 957 969 IPR008266 GO:0004672|GO:0006468
Ahy20g3135 1108 SUPERFAMILY Ribonuclease H-like 17 116 IPR012337 -
Ahy20g3135 1108 Gene3D Ribonuclease Inhibitor 499 615 IPR032675 -
Ahy20g3135 1108 Gene3D Ribonuclease Inhibitor 616 743 IPR032675 -
Ahy20g3135 1108 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 161 1104 - -
Ahy20g3135 1108 ProSiteProfiles Protein kinase domain profile. 829 1108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g3135 1108 SUPERFAMILY Protein kinase-like (PK-like) 820 1102 IPR011009 -
Ahy20g3135 1108 ProSiteProfiles Leucine-rich repeat profile. 552 574 IPR001611 GO:0005515
Ahy20g3135 1108 Gene3D - 16 127 IPR036397 GO:0003676
Ahy20g3135 1108 SMART LRR_sd22_2 277 303 - -
Ahy20g3135 1108 SMART LRR_sd22_2 550 576 - -
Ahy20g3135 1108 SMART LRR_sd22_2 598 630 - -
Ahy20g3135 1108 SMART LRR_sd22_2 406 432 - -
Ahy20g3135 1108 SMART serkin_6 829 1100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g3135 1108 Pfam Protein kinase domain 835 1096 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g3135 1108 Gene3D Ribonuclease Inhibitor 332 401 IPR032675 -
Ahy20g3135 1108 ProSiteProfiles Integrase catalytic domain profile. 17 107 IPR001584 GO:0015074
Ahy20g3135 1108 SUPERFAMILY L domain-like 195 517 - -
Ahy20g3135 1108 PRINTS Leucine-rich repeat signature 550 563 - -
Ahy20g3135 1108 PRINTS Leucine-rich repeat signature 280 293 - -
Ahy20g3135 1108 SMART LRR_typ_2 598 622 IPR003591 -
Ahy20g3135 1108 SMART LRR_typ_2 301 325 IPR003591 -
Ahy20g3135 1108 SMART LRR_typ_2 406 429 IPR003591 -
Ahy20g3135 1108 SMART LRR_typ_2 671 695 IPR003591 -
Ahy20g3135 1108 SMART LRR_typ_2 430 454 IPR003591 -
Ahy20g3135 1108 SMART LRR_typ_2 550 574 IPR003591 -
Ahy20g3135 1108 SMART LRR_typ_2 277 300 IPR003591 -
Ahy20g3135 1108 Pfam Leucine Rich Repeat 673 693 IPR001611 GO:0005515
Ahy20g3135 1108 Pfam Leucine Rich Repeat 552 573 IPR001611 GO:0005515
Ahy20g3135 1108 Gene3D Phosphorylase Kinase; domain 1 789 911 - -
Ahy20g3135 1108 Gene3D Transferase(Phosphotransferase) domain 1 912 1107 - -
Ahy20g3135 1108 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 161 1104 - -
Ahy20g3135 1108 Pfam Leucine rich repeat N-terminal domain 180 219 IPR013210 -
Ahy20g3135 1108 SUPERFAMILY RNI-like 423 734 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3135 Ahy-Chr20 141994961 142010333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3135 156 1005 Receptor kinase-like Gene Family AT4G08850 39.282 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy20g3135 Pkinase 5.20E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3135 - - ahf:112786571 2191