Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3104 ATGAAAACTTCATCTTCTCTTCATCCACACCACCATTTTCCTTCCACTAAATTTTACACTTCCATCACCACAAGAGTTTACATCAGGACTCAACTCTCTTTTCCTGCAAAGGTGTTCTTGTGCCAGGCAAAATCTGGCACAAATGGGTCGTTAAACGTGCGAGTGATGCCTCCCACTCTGTTAGCAGCAGAAAAGGAAGAAGCCAAGGCTGTATTGATGCTGTTTTTGAAAAAAGAAGGCTTGAGCAATGCCATTGCAGCGAGAACTGTCAACAAATCAGATCCTTTTATTGATCACCTTGTCTCGGTGCTTCACTCTAAACACAAATCTCGGTACCTCGTAGGGAGAGAACTTACAACACTTGAAATCAGGGATGCTCTTGTCCCATACCTTGAATCTCTTCTCGAAGAGCACGGTGATAGTCTAGTCGATGTAGTCGAAAACTATCCAAATCCCCCGGTTAAGGAAAAACCAGCTGTGCAGGTTCCTCCTCCTACTCCAATAATAGACTCTAAGAAGCTTAGAACCGTGTCTCGAGTGAATGCAATAGACACGACTGCTGGCAATCTTCGCCCTCATATTGTCTATCTCATAGAGTTCGGTATGAGTATTGAGCAAATCAATGGTATTATTCGGCGATTCCCGTCTTTTGCCTACTACAGCTTGGAGGGTAAAATTAAGCCTGTAGTTGAGTTTTTTCTTGAACTTGGAGTTCCGAAAGAGGACATCCCCACCATCCTCACTAAAAGGCCTCAATTATGTGGAATCAGCCTGTCGGAAAATCTTAAACCCACCATGAAGTTCTTAGAATCCTTAGGCGTTGACAAGAAACAATGGGCGAAGGTGATATACCGCTTCCCGGCTCTTCTAACTTATAGTAGGGAGAAGGTGGAGGAGAGCATAGATTTTCTCCGAGAATCAGGCCTGTCAGACGATAACATAGGTAAGATCTTAACTCGCTGCCCCAATATTGTAAGTTATAGTGTAGAGGACAACCTACGACCCACGGCTAATTACTTCCGATCCTTGGGAGTGGATGTTGGTGTTCTTCTGTTCCGTTGTCCACAGAATTTCGGTCTTAGCATTGAGGCCAATCTGAAGCCTGTAACACAGTTTTTCTTGGAAAAGGGATACACTTTGGATGAAATTGGGACTATGATTTCAAGATTTGGTGCCTTGTACACCTTTAGCTTGTCAGACAATTTGATTCCGAAATGGGATTTCTTCATCACTATGGGTTACCCAAATTCTGAGCTTGTTAAATTCCCTCAGTTTTTTGGATACAGTTTGGAAGAAAGGATTAAACCAAGATATGCACGGATGAAGAGAGCTGGGGTCAGGTTATTGCTCAACCAGGTTCTGTCACTGTCTAGCCGGAACTTCGAAGAGGCCTTAGAAAAGAAACTGAAAAAGAATTCGAGTTGA 1425 0.433 MKTSSSLHPHHHFPSTKFYTSITTRVYIRTQLSFPAKVFLCQAKSGTNGSLNVRVMPPTLLAAEKEEAKAVLMLFLKKEGLSNAIAARTVNKSDPFIDHLVSVLHSKHKSRYLVGRELTTLEIRDALVPYLESLLEEHGDSLVDVVENYPNPPVKEKPAVQVPPPTPIIDSKKLRTVSRVNAIDTTAGNLRPHIVYLIEFGMSIEQINGIIRRFPSFAYYSLEGKIKPVVEFFLELGVPKEDIPTILTKRPQLCGISLSENLKPTMKFLESLGVDKKQWAKVIYRFPALLTYSREKVEESIDFLRESGLSDDNIGKILTRCPNIVSYSVEDNLRPTANYFRSLGVDVGVLLFRCPQNFGLSIEANLKPVTQFFLEKGYTLDEIGTMISRFGALYTFSLSDNLIPKWDFFITMGYPNSELVKFPQFFGYSLEERIKPRYARMKRAGVRLLLNQVLSLSSRNFEEALEKKLKKNSS* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3104 474 Pfam mTERF 189 303 IPR003690 GO:0003690|GO:0006355
Ahy20g3104 474 Pfam mTERF 187 376 IPR003690 GO:0003690|GO:0006355
Ahy20g3104 474 Pfam mTERF 298 462 IPR003690 GO:0003690|GO:0006355
Ahy20g3104 474 PANTHER CGI-12 PROTEIN-RELATED 26 472 IPR003690 GO:0003690|GO:0006355
Ahy20g3104 474 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF5, CHLOROPLASTIC 26 472 - -
Ahy20g3104 474 Gene3D Transcription termination factor 3, mitochondrial 251 471 IPR038538 -
Ahy20g3104 474 SMART mt_12 244 275 IPR003690 GO:0003690|GO:0006355
Ahy20g3104 474 SMART mt_12 280 310 IPR003690 GO:0003690|GO:0006355
Ahy20g3104 474 SMART mt_12 315 346 IPR003690 GO:0003690|GO:0006355
Ahy20g3104 474 SMART mt_12 348 379 IPR003690 GO:0003690|GO:0006355
Ahy20g3104 474 SMART mt_12 384 415 IPR003690 GO:0003690|GO:0006355
Ahy20g3104 474 SMART mt_12 208 239 IPR003690 GO:0003690|GO:0006355
Ahy20g3104 474 SMART mt_12 416 447 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3104 Ahy-Chr20 141701600 141708980 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy20g3104 mTERF 2.20E-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3104 K15032 K12177 gmx:100781900 738.799