Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3096 ATGAAGCTTTTCGACGCACACTGTCATCTTCAAGATCCAAGAATCTTAAGCAACGTTCCCCAAATCATAGCAACCGCCCAAAGCGTAGGTGTCGCTGCCTTCGCCGTCAATGGACTCTCCGAGAAAGACTGGCTTCAGGTCAAACACATGTCCCAATCGTATCCTTCAGTCATCCCTTCCTTTGGCCTCCATCCATGGTTCGTTGCAGAAAGGTCTCCGAATTGGTTCAACACTCTCAAACAATTCTTCGATTCTACGCCATCCGCCGCCGTCGGAGAGATTGGTCTTGACAAAGGATCTCATGGAAGGAACGTTGATTTTTCAGATCAGGTTGAAGTATTCAAGAACCAGCTTCAACTTGCAAAATCGTTAAACAAGCCGGCATCTGTACACTGTGTTCGTGCCTTCGGTGAACTTCTTGAGATGATGAAGTCAATGGGACCTTTTCCTGCCGGTGTTATTCTTCATTCTTACCTAGGATCTGCAGAGATGGTTCCTGAATTTTCAAAGCTCGGTGCTTATTTTTCCTTCTCAGGGTTTCTAATGTCATTAAAAGCAAATAAGGCAAAGAAAATGCTGCAGATGGTCCCTTCTGATAGAATTTTGTTGGAGACCGATGCACCTGATGCACTGCCAAAGTCAAACATAGATTCTCTTTTTTTCGTCGATGGAGATCCTTCTCTCCCGGAGGAGCCTCAAGGTCAAAGCTCAACATCATCCTCAGCATCTGGTACATCGCTTAATGATGGGTCCCAAGTCTTAACAGATGCTTCGACATTGCCAAAGGAAACCCTAAATCATCCAGCCAACATACATCTGGTACTTGATTATGTTGCATCAATGCTAGAGATTACAAAAGAAGAGCTTGCTGAACTAAGTTATCAAAACGCAGTGCGAGTATTCTCCTATGAAGGTTCGAAAGTACTCCACGCATAA 936 0.4455 MKLFDAHCHLQDPRILSNVPQIIATAQSVGVAAFAVNGLSEKDWLQVKHMSQSYPSVIPSFGLHPWFVAERSPNWFNTLKQFFDSTPSAAVGEIGLDKGSHGRNVDFSDQVEVFKNQLQLAKSLNKPASVHCVRAFGELLEMMKSMGPFPAGVILHSYLGSAEMVPEFSKLGAYFSFSGFLMSLKANKAKKMLQMVPSDRILLETDAPDALPKSNIDSLFFVDGDPSLPEEPQGQSSTSSSASGTSLNDGSQVLTDASTLPKETLNHPANIHLVLDYVASMLEITKEELAELSYQNAVRVFSYEGSKVLHA* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3096 311 MobiDBLite consensus disorder prediction 230 253 - -
Ahy20g3096 311 MobiDBLite consensus disorder prediction 227 253 - -
Ahy20g3096 311 PANTHER OSJNBA0020J04.13 PROTEIN 1 309 - -
Ahy20g3096 311 SUPERFAMILY Metallo-dependent hydrolases 3 302 IPR032466 -
Ahy20g3096 311 Gene3D - 1 303 - -
Ahy20g3096 311 Pfam TatD related DNase 4 302 IPR001130 GO:0016788
Ahy20g3096 311 PIRSF DNase_TatD 1 306 IPR001130 GO:0016788
Ahy20g3096 311 CDD TatD_DNAse 3 302 IPR001130 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3096 Ahy-Chr20 141629468 141632238 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3096 K03424 - gmx:100815482 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3096 20 141629468 141632238 Ahy10g2535 10 114869785 114872890 hybridization
Ahy16g2387 16 130557166 130560376 Ahy20g3096 20 141629468 141632238 PCT
Ahy6g2046 6 99532430 99535652 Ahy20g3096 20 141629468 141632238 PCT
Ahy20g3096 20 141629468 141632238 Ahy16g2387 16 130557166 130560376 PCT
Ahy20g3096 20 141629468 141632238 Ahy6g2046 6 99532430 99535652 PCT