Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3092 ATGGATATAGACCTTAGGTTACCTTCTGGTGAACATGATAAAGAGGATGAAGAAACAGCTACAATTGATAACATATTGGATGGTGAAGAAAAATTGAATAATGGAGCTATGGAGGGGAGAAATATGGTTGATCCTGGTATGGAGTTACAAGCTCTAAATGGTGGTGATTTGAATTCGCCCACACTTGATATGGTAATATTCAAGGAAGATACTAATCTTGAGCCACTTTCTGGCATGGAATTTGAGTCTCATGGGGAGGCTTATTCATTCTACCAAGAATATGCTCGTTCAATGGGATTCAACACTGCAATACAGAATAGCCGACGCTCCAAAACATCAAGAGAATTCATAGACGCAAAGTTTGCTTGTTCTAGGTACGGAACAAAACGAGAATATGACAAATCGTTCAATCGACCACGTGCAAGACAGAGCAAGCCAGATTCTGAAAATTCAACCGGTCGAAGATCTTGTTCCAAGACTGACTGTAAAGCAAGTATGCACGTGAAAAGAAAACATGATGGAAAATGGGTTATACACAGTTTTGTGAAGGAGCATAATCATGAGCTTTTACCAGCCCAAGCAGTCAGTGAACAAACAAGAAGAATGTATGCTGCAATGGCCAGACAGTTTGCTGAATACAAGACTGTGGTTGGTCTCAAGAATGAAAAGAATCCATTTGATAAAGGACGGAATTTGAGCCTTGAATCAGGAGACGCTAAACTCATGCTGGATTTTTTTGTACAGATGCAAAATATGAACTCTAACTTCTTTTATGCAGTTGATATTGATGATGATCAAAGACTGAAAAATATTCTATGGATTGATGCTAAAAGTAGGCATGACTATACCAACTTTTGTGATGTAGTGTCATTTGATACCACCTATGTTAGAAACAAATATAAGATGCCTCTTGCACTTTTTGTTGGAGTGAACCAGCACTATCAATTTATACTACTGGGGTGTGCCTTAATATCAGATGAAAGTCCCACAACTTTTTCTTGGCTGATGCGGATGTGGCTGAAAGGAGTTGGTGGTCAAGTTCCAAAAGTGATGATTACTGAACATGACAAGACTTTGAAGTCAGTTATTGCAGATATATTCCCTAGTGCTTGTCATTGTGTCTCTTTATGGCATATTGTGGGTAAGATATCTGAAAATATGGCTCATGTAATTAAAAAACATGAGAAGTTTTTGGCAAAATTTGAAAAATGCATATACAGGTCATTGACCAGTGATGACTTTGAGAAGAGATGGTGGAAAATTGTTGATAGGTTTGAACTTCGAGAGGATGAATGCATGCAGTCACTATATGAAGATCGTAAGTTGTGGGCACCAACATTCATGAGGGATGTTTTCTTAGGTGGTATGTCTACTGTCCAACGATCCGAAAGTGTAAATTATTACTTTGACAAATATGTTCACAAGAAGACCTCTGTGCAAGATTTTGTTAAATTGTATGAAGCAATCTTGCAAGACAGGTACGAAGAGGAAGCCAAAGCAGATTCTGATACCTGGAATAAAGTAGCAACATTGAAAACACCTTCACCGTTGGAGAAGAGTGTCGCAGGGGTTTACACGCATGCTGTATTCAAGAAGATTCAAGCTGAGGTTGTTGGTGCAGTTGCTTGTCATCCTAAAGCTGACAGACAAGATGAGACCACTATTATTCATAGGGTTCACGACATGCAATCAAATAAGGACTTCTTTGTTGTGGTGAATCAAGTAAAATCAGAATGGTCTTGTATATGTCGTTTATTTGAATATAGAGGCTATCTTTGTCGACACATATTGATTGTTCTGCAATATTCTGGCCATTCTGCAATCCCATCCCATTATATTTTGAAACGCTGGACCAAAGACGCAAAGGTCCGGAATATAATGGGAGAAGAGTCTGAACATATGCTGGCAAGGGTGCAACGATACAATGATTTATGTCAGCGAGCATTTAAACTGAGTGAAGAGGGATCTCTTTCACAAGAGAGTTACAGTATTGCAGTCCATGCACTGCACGAAGCACAAAAAAGTTGTGTGAGCGTTAATAATTCTGGCAAGAGTCCCATGGAAGTTGGTACATCAGTCACTCATGCTCAGCTTTCTACTGAAGAAGATACCCAAAGTAGAAATATGGGCAAATCAAACAAAAAGAAAAATCCAGCTAAAAAGAAAAAGGTGAATGCCGAGGCTGAAGTGTTGACTGTTGGAGCAATTGACAACATGCAACAAATGGTTTGTCCTCCCGCTGACAAGTTCAGCACAAGAGCTGCAGTAACCCTTGATGGCTATTACGGCACACAACAACAGGTGCAGGGAATGTTGAACTTAATGGGACCGCGAGATGATTTTTACGGGAATCAGCAGACTCTTCAGGGACTGGGACCAATAAGTTCAATACCAACAAGTCACGACGGTTATTATAGTGCGCACCAGGGCATGCCAAATCTGGCGCAATTGGATTTTTTGCGAACAGGTTTCACATATGGCATCCGGGATGATCCGAATGTAAGAGCAGCACAGTTGCATGAGGATCCGTCGAGGCATGCATGA 2544 0.4017 MDIDLRLPSGEHDKEDEETATIDNILDGEEKLNNGAMEGRNMVDPGMELQALNGGDLNSPTLDMVIFKEDTNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQSKPDSENSTGRRSCSKTDCKASMHVKRKHDGKWVIHSFVKEHNHELLPAQAVSEQTRRMYAAMARQFAEYKTVVGLKNEKNPFDKGRNLSLESGDAKLMLDFFVQMQNMNSNFFYAVDIDDDQRLKNILWIDAKSRHDYTNFCDVVSFDTTYVRNKYKMPLALFVGVNQHYQFILLGCALISDESPTTFSWLMRMWLKGVGGQVPKVMITEHDKTLKSVIADIFPSACHCVSLWHIVGKISENMAHVIKKHEKFLAKFEKCIYRSLTSDDFEKRWWKIVDRFELREDECMQSLYEDRKLWAPTFMRDVFLGGMSTVQRSESVNYYFDKYVHKKTSVQDFVKLYEAILQDRYEEEAKADSDTWNKVATLKTPSPLEKSVAGVYTHAVFKKIQAEVVGAVACHPKADRQDETTIIHRVHDMQSNKDFFVVVNQVKSEWSCICRLFEYRGYLCRHILIVLQYSGHSAIPSHYILKRWTKDAKVRNIMGEESEHMLARVQRYNDLCQRAFKLSEEGSLSQESYSIAVHALHEAQKSCVSVNNSGKSPMEVGTSVTHAQLSTEEDTQSRNMGKSNKKKNPAKKKKVNAEAEVLTVGAIDNMQQMVCPPADKFSTRAAVTLDGYYGTQQQVQGMLNLMGPRDDFYGNQQTLQGLGPISSIPTSHDGYYSAHQGMPNLAQLDFLRTGFTYGIRDDPNVRAAQLHEDPSRHA* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3092 847 MobiDBLite consensus disorder prediction 686 706 - -
Ahy20g3092 847 MobiDBLite consensus disorder prediction 132 164 - -
Ahy20g3092 847 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 48 765 IPR031052 GO:0006355
Ahy20g3092 847 Pfam SWIM zinc finger 575 602 IPR007527 GO:0008270
Ahy20g3092 847 Pfam MULE transposase domain 288 380 IPR018289 -
Ahy20g3092 847 MobiDBLite consensus disorder prediction 686 723 - -
Ahy20g3092 847 Pfam FAR1 DNA-binding domain 89 191 IPR004330 -
Ahy20g3092 847 ProSiteProfiles Zinc finger SWIM-type profile. 568 604 IPR007527 GO:0008270
Ahy20g3092 847 PANTHER FAR-RED ELONGATED HYPOCOTYLS 3-RELATED 48 765 - -
Ahy20g3092 847 SMART 26again6 579 606 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3092 Ahy-Chr20 141597691 141603713 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g3092 FAR1 1.20E-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3092 - - gmx:100817034 1510.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3092 20 141597691 141603713 Ahy20g3092 20 141597691 141603713 ECH