Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3088 ATGAAGAACATTCTCAAGAAGCTTCATATCATGCCTACTACTAACCAATCACAAGAGGACCAAGCTCCTGCTTCATCAAGGTCCAATAAGAAGATTTCTAATTGGTTGCATTCTGTATCCAATAGGCAGACTCCGACTCCGACTCCGGCGACGGCGACGGAGACGGATCCTTCTGATTCACTTGCCGGTGGCGGTTTGGATTCGGCGCCGTCTAGCACTTTTAGGGAACCTGAAGTGGAGGACGACGACGAAGAAGAAGAATATCAGATACAACTTGCTTTAGAGCTTAGTGCAAGGGAGGATCCTGAGGCCGTTCAGATTGAAGCTGTTAAGCAGATTAGTTTGGGATCCTGTGATCCTCATAACACGCCGGCACAAGTCGTTTCATATCGGTACTGGAATTACAATGCTCTTGGTTTTGATGACAAGATCTCGGATGGTTTCTATGATCTGTATGGGACTGTGACCGAGTCGAACTCTGCAAGAATGCCATGCCTTTTGGATCTGCAAGGAACATCAACTTCAGATTCTGTCACTTGGGAAGCAATCTTGGTCAATAGGGCTGCAGATTCCAGTTTGTTGAAACTCGAGCAGGAGGCCCAAGAGCTGGCAGCTAAGGCAAGAAAAGATTTTGAGGTAGTTGTAGATAGTAATTTGGTGCATAAGCTTGCTATCTTAGTGGCTGACTACATGGGTGGACCAGTTGAAGATCCTGAAAGCATGGCAAGAGCCTGGAGGAGTCTCACTTACAGTCTAAAAGCAACCCTTGGTAGTATGGTGTTACCACTGGGCTCACTGACCATAGGATTGGCTAGGCATCGTGCCTTGTTGTTTAAGGTTTTAGCTGATAGTGTGGGCATCCCATGTCAGCTGGTGAAAGGACTACAATATACAGGATCCGACGATGTGGCTATGAACTTTGTCAAGATTGATGACGGGAGGGAGTACATTGTTGACCTGATGGCTGATCCAGGAACACTTATTCCTTCTGATGCAGCTGGATCACACATTGACTATGATGAATCTTCTTTTGTAGCTACTCCTTCATCAAGAGACCTTGACTCCTCTCGTATGGCATCATTTGGCAGTGGGGTTGGAAGTTCATTTGATGGAACTCTAGACTTTGGGACTCAAGATAAAGGAAACAGATCAAAACATTCTGTCCATGCAGGGAAAGCATCTGATGTAATCAGTCCCACTACAGGCAGGGAAGAAGTAAAGAATGCCATAGATAAATTCAAAGGTGTTAGTAATGTGGAAAAGGTCATAGTGAGAGAATCTCCTAGCAGACTTAATTATCCATATATGCATGGAAGATCTCCTTCTTGGACTGAAGGGATCAGTTCCCCTGCAGTGCATGGAATGAAAGTTAAAGATGTCTCCCAATATATGATTGATGCTGCAAAGGAGAACCCTAAATTAGCTCAAAAGCTTCATGATGTTTTACTTGAAAGTGGCGTTGTTGCTCCTCCAAACCTATTTACTGAAGTTTATCAGGAGCAGCTAGGTTCCCCATCTGAGGCAAATTTTCCAGTTGATGAAAAAGGTGAATCAAAACAGGGACGTATACAGCAAGAAACTAAGGTTGATGATAATCAAGGTCTTGCTCAGTTTTTACCTCCTTTGCCCCTTCAGAGAGTACATGCCAAAGCAAGTCCTCGCAGTCAGCTGGACCATTCTAAGCCTTTAGAGGGTTTGGGAGTCAACTTACCTCTTGATACAAGGGAGGCTACTGGACAGCAAATATCGTCTCAGGCAGAAGCAACTCAGGTAAAATATGGGAAAAATGTCCCAGTTGCTGCGGCTGCTGCTGCCGCCGCTGCTGTTGTTGCATCTTCTATGGTAGTTGCTGTGGCGAAGTCAAGCACTGATTCAAATCTTGAGATTCCAGTAGCAGCAGCTGCCACTGCTACTGCTGCAGCTGTAGTAGCAACCACTGCCGCTGTCAATAAACAGTATGAGCAGGGTAGTCGAAGTGATGCAGATGCAGAGGGTTTTGGTCATGATCTGAGGGGTAATAGTGACGGAGAGCATGTTGCTTTAGGAGCAAACTCAGAGGGCGAGAGAATATCTGATAGATCAGCAAGAAGTGATAGTGCAAAATCGGATTCTGCCCTAGATGATGTTGCTGAGTATGACATTCCATGGGAGGAAATCATGATTGGCGAGCGTATTGGGCTTGGATCATATGGGGAAGTGTACCACGGTGATTGGCATGGAACTGAAGTTGCTGTAAAGAGGTTTCTAGATCAAGTTATCTCCGGTGAATTACTTGAAGAGTTCAAAAGTGAGGTCCAAATAATGAAGAGACTAAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTAACCCGGCCACCAAATCTTTCTATTGTTACTGAATTTCTTCCTAGAGGGAGTTTGTATAGGTTAATTCACCGACCTAACAATCAACTAGATGAGCGAAGGCGGTTGAGGATGGCCTTAGATGCTGCTCGTGGAATGAACTATTTGCACAGCTGCTCTCCAGTAATAGTGCATCGTGATTTGAAGTCCCCTAATCTTCTTGTAGACAAAAACTGGGTTGTAAAGGTTTGTGATTTTGGTTTATCACGAATGAAGCATAGTACATTCCTTTCTTCCAGATCAACTGCAGGAACGGCTGAGTGGATGGCTCCAGAAGTCTTAAGAAATGAGCTTTCCAATGAAAAGTGTGATGTGTATAGCTTTGGGGTTATATTGTGGGAACTCTCTACACTGCAGCAACCATGGGAAGGAATGAATCCAATGCAAGTTGTTGGTGCTGTTGGTTTCCAACATCGGCGTCTTGACATTCCAGATGATGTGGACCCTGCAGTGGCAGATATCATCAGGCAATGCTGGCAGACAGATCCAAAGTTGAGACCCACGTTTGCCGAAATTATGGCTGCTTTGAAGCCATTGCAGAAGCCCATTACTGGTTCTCAAGTGGTAAGAACAAGTGGTCAGTCATCCAGAGCTGCCGAAGGCCCTGCATGA 2997 0.4518 MKNILKKLHIMPTTNQSQEDQAPASSRSNKKISNWLHSVSNRQTPTPTPATATETDPSDSLAGGGLDSAPSSTFREPEVEDDDEEEEYQIQLALELSAREDPEAVQIEAVKQISLGSCDPHNTPAQVVSYRYWNYNALGFDDKISDGFYDLYGTVTESNSARMPCLLDLQGTSTSDSVTWEAILVNRAADSSLLKLEQEAQELAAKARKDFEVVVDSNLVHKLAILVADYMGGPVEDPESMARAWRSLTYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSVGIPCQLVKGLQYTGSDDVAMNFVKIDDGREYIVDLMADPGTLIPSDAAGSHIDYDESSFVATPSSRDLDSSRMASFGSGVGSSFDGTLDFGTQDKGNRSKHSVHAGKASDVISPTTGREEVKNAIDKFKGVSNVEKVIVRESPSRLNYPYMHGRSPSWTEGISSPAVHGMKVKDVSQYMIDAAKENPKLAQKLHDVLLESGVVAPPNLFTEVYQEQLGSPSEANFPVDEKGESKQGRIQQETKVDDNQGLAQFLPPLPLQRVHAKASPRSQLDHSKPLEGLGVNLPLDTREATGQQISSQAEATQVKYGKNVPVAAAAAAAAAVVASSMVVAVAKSSTDSNLEIPVAAAATATAAAVVATTAAVNKQYEQGSRSDADAEGFGHDLRGNSDGEHVALGANSEGERISDRSARSDSAKSDSALDDVAEYDIPWEEIMIGERIGLGSYGEVYHGDWHGTEVAVKRFLDQVISGELLEEFKSEVQIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHSCSPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNELSNEKCDVYSFGVILWELSTLQQPWEGMNPMQVVGAVGFQHRRLDIPDDVDPAVADIIRQCWQTDPKLRPTFAEIMAALKPLQKPITGSQVVRTSGQSSRAAEGPA* 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3088 998 CDD STKc_MAP3K-like 725 971 - -
Ahy20g3088 998 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 82 988 - -
Ahy20g3088 998 MobiDBLite consensus disorder prediction 512 526 - -
Ahy20g3088 998 Pfam Protein tyrosine and serine/threonine kinase 720 971 IPR001245 GO:0004672|GO:0006468
Ahy20g3088 998 Gene3D Transferase(Phosphotransferase) domain 1 798 982 - -
Ahy20g3088 998 Gene3D Phosphorylase Kinase; domain 1 712 796 - -
Ahy20g3088 998 ProSitePatterns Protein kinases ATP-binding region signature. 725 746 IPR017441 GO:0005524
Ahy20g3088 998 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 82 988 - -
Ahy20g3088 998 SUPERFAMILY Protein kinase-like (PK-like) 707 969 IPR011009 -
Ahy20g3088 998 MobiDBLite consensus disorder prediction 504 526 - -
Ahy20g3088 998 Coils Coil 186 206 - -
Ahy20g3088 998 PRINTS Tyrosine kinase catalytic domain signature 898 920 IPR001245 GO:0004672|GO:0006468
Ahy20g3088 998 PRINTS Tyrosine kinase catalytic domain signature 942 964 IPR001245 GO:0004672|GO:0006468
Ahy20g3088 998 PRINTS Tyrosine kinase catalytic domain signature 793 806 IPR001245 GO:0004672|GO:0006468
Ahy20g3088 998 PRINTS Tyrosine kinase catalytic domain signature 879 889 IPR001245 GO:0004672|GO:0006468
Ahy20g3088 998 PRINTS Tyrosine kinase catalytic domain signature 832 850 IPR001245 GO:0004672|GO:0006468
Ahy20g3088 998 MobiDBLite consensus disorder prediction 657 675 - -
Ahy20g3088 998 MobiDBLite consensus disorder prediction 654 702 - -
Ahy20g3088 998 SMART serkin_6 719 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g3088 998 Pfam Ethylene-responsive protein kinase Le-CTR1 125 328 - -
Ahy20g3088 998 MobiDBLite consensus disorder prediction 1 84 - -
Ahy20g3088 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 838 850 IPR008271 GO:0004672|GO:0006468
Ahy20g3088 998 MobiDBLite consensus disorder prediction 9 58 - -
Ahy20g3088 998 ProSiteProfiles Protein kinase domain profile. 719 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3088 Ahy-Chr20 141560682 141568296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3088 1 991 MAP Kinase Kinase Kinase AT1G73660 61.441 0.0 1134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Ahy20g3088 PK_Tyr_Ser-Thr 2.00E-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3088 - - aip:107622443 1507.27