Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3078 ATGGAAAGGATTCAAGATAAGGCAGATGAAAATAGTATATCTGAGCATTCGCCTTCATCCGTTGTTGCTCTAGCAATTAAGGGTAACAAGAAAAGCAAATTTGTGGTACAGTGGGCACTGAATAAGTTTGTCCCTGAGGGTATGATTGTCTTCAAGCTGATACACGTCCATCCCGTGGGAAATGTGATTCCTATTTCACAAGTGCGTACCGATGTAGCAAACGCTTTCAGAAAGGAAGTGGAGTGGCAGACAAATCAAAAGCTTCTACCTTTCAAAAGAATGTGTGAGCAGAGAAAGGTCCATGCAGATATTGTGGTGATTGAATCAGATGACGTGGCAGGTGCAGTAGCAGAGGAAGTAGCTAAGGGTGCTATAACCAAACTCGTCGTTGGAGCATCATCTCGTAGCATATTTACCAGTAAACATAAGGGTATATCTGCAAAAATCTCAGTATGCACTCCAAGATTTTGTACAGTCTATGCTACATCGAAAGGAAAACTGTCCATACGACCATCAGACATACAAGTTGATGATAGCATTATCGATGACACTAGTGGAATCAGTTTTTCCTCCAGCAGCTCATCAAATTACACTTCAACCACTCAGACAGACACTGGCTCGCTTGCATCATATGCTCCTTCGCATTCATCTTCCTTAACTACACAGCGATTCCAAGCTCTTTCAAGTATAAATCAGACATTATTGAAGACAAGTACTGGTTTAATTGAAACTAATCATTCTAGAGGTCGATCTCTAGATTTTGGGAGAGAGAACATTACTTCAACTTCTTCCAGAAACTCTGATATTGATTATGCTTTGAATCGTTCCTCTAGTTACAAAAGCGTTATATCTGATACCGAATCTTTGAATTTTGATCAAAATTCTGCCAAGGAGGAACCATTAGCGATTGAACATCCTTCACCTAATAGGCAGGAAAATGTTAACCTTGAGCTGGAAAAGTTGAGAATTGAACTAAGACAAGCCCAAGGATTGCATGCAGTAGCTCAAAGCGAAAGCATAGATGCATCACGAAAGTTAAATGACCTCAGCAAGAGGCGATCAGAAGAATCCATGAAACTAAAGGAGATTCTTGCTAAGGAGGAAATGGCCAAAGAATTGGCAAGACATGAAAGAGAGAAATATGAAGCTGCAGCAAGAGAAGCGGAATATTTGAAAGAGTGTGCTGAAAGAGAAGCTGCAGAAAGAAAAGAAGCAGAGTTAAAGGCTATCCGTGCGGCTAAAGATAAAGAAAAGCTGGAGGATGCTATTACTGGTTCCACGCCGTTGTACCGAAAGTTTGCGTGGGATGAAATAGTGTCCGCTACCTCATCATTCTCTGAAGATTTGAAAATTGGAATGGGAGCATATGGAAAGGTGTACAAGTGCAGTTTGTATCATACAACTGTTGCTGTTAAAGTTCTTCACCCTAATAGGGGCCACAATAGCAAGCAATTCCAGCAAGAGCTTGAGATACTTAGCAGAACTCGTCATCCAAACTTGCTTCTTCTTCTTGGTGCATGTCCTGAGCATGGATGCCTTGTGTATGAATATATGGAGAATGGTAACTTGGATGATAGATTACTCCGGAAAAACAATGCCACCCCTATTCCATGGTTTGAGAGGTATCGAATAGCATGGGAAGTTGCATCAGCTCTATCCTTTCTTCACAGTTCGAAGCCAAAACCAATCATCCATCGTGATTTGAAGCCAGCGAACATCCTTCTTGGTCGTAACCTTGTCAGCAAGATTGGTGATATTGGCCTTTCGACAATGCTTCAGTCAGATAATTTATCCACCATGTACAAGGACACTGAGCCTGTTGGGACACTCTGCTACATAGACCCTGAGTATCAAAGAAATGGATTGATATCTCCAAAATCAGATGTTTATGCTTTGGGAATAGTTATATTACAGTTATTGACTGCAAAACCAGCCATAGGAATTACTCATGTGGTTGAAACAGCAATTGGTGCTGGGAAGTTGACGGATATATTGGATCCAGAGGCAGGAAGTTGGCCATTTCAAGAGACATTAGAATTAGCTCAATTAGGACTGAGCTGTGCTGAACTTCGGCGAATAGACCGGCCTGATTTGAAAGATCATGTTCTTCCTAAACTAGAAAGATTGAAAGAAATTGCTGATAGGACTCAAGAATCTCCTTCAATAGTATTTGTTAGATCCAGACCTCCCAATCACTTTATCTGTCCAATACTTCAGGATGTGATGGATGATCCTTGTGTTGCTGCGGATGGATATTCATATGATCGTAAAGCAATTGAAAAGTGGTTTCAAGAGAATGACAAATCACCAATGACAAATATGGCCTTACCACACAAGCATCTAATTCCTAATTACACTCTCCTGTCAGCAATTATGGAATGGAAGTCTCAATAA 2394 0.4081 MERIQDKADENSISEHSPSSVVALAIKGNKKSKFVVQWALNKFVPEGMIVFKLIHVHPVGNVIPISQVRTDVANAFRKEVEWQTNQKLLPFKRMCEQRKVHADIVVIESDDVAGAVAEEVAKGAITKLVVGASSRSIFTSKHKGISAKISVCTPRFCTVYATSKGKLSIRPSDIQVDDSIIDDTSGISFSSSSSSNYTSTTQTDTGSLASYAPSHSSSLTTQRFQALSSINQTLLKTSTGLIETNHSRGRSLDFGRENITSTSSRNSDIDYALNRSSSYKSVISDTESLNFDQNSAKEEPLAIEHPSPNRQENVNLELEKLRIELRQAQGLHAVAQSESIDASRKLNDLSKRRSEESMKLKEILAKEEMAKELARHEREKYEAAAREAEYLKECAEREAAERKEAELKAIRAAKDKEKLEDAITGSTPLYRKFAWDEIVSATSSFSEDLKIGMGAYGKVYKCSLYHTTVAVKVLHPNRGHNSKQFQQELEILSRTRHPNLLLLLGACPEHGCLVYEYMENGNLDDRLLRKNNATPIPWFERYRIAWEVASALSFLHSSKPKPIIHRDLKPANILLGRNLVSKIGDIGLSTMLQSDNLSTMYKDTEPVGTLCYIDPEYQRNGLISPKSDVYALGIVILQLLTAKPAIGITHVVETAIGAGKLTDILDPEAGSWPFQETLELAQLGLSCAELRRIDRPDLKDHVLPKLERLKEIADRTQESPSIVFVRSRPPNHFICPILQDVMDDPCVAADGYSYDRKAIEKWFQENDKSPMTNMALPHKHLIPNYTLLSAIMEWKSQ* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3078 797 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 18 795 - -
Ahy20g3078 797 SUPERFAMILY Protein kinase-like (PK-like) 427 700 IPR011009 -
Ahy20g3078 797 Coils Coil 400 422 - -
Ahy20g3078 797 Gene3D Transferase(Phosphotransferase) domain 1 518 725 - -
Ahy20g3078 797 ProSiteProfiles U-box domain profile. 728 797 IPR003613 GO:0004842|GO:0016567
Ahy20g3078 797 CDD STK_N 21 165 - -
Ahy20g3078 797 ProSiteProfiles Protein kinase domain profile. 445 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g3078 797 Coils Coil 311 338 - -
Ahy20g3078 797 Pfam U-box domain 730 796 IPR003613 GO:0004842|GO:0016567
Ahy20g3078 797 SUPERFAMILY RING/U-box 726 796 - -
Ahy20g3078 797 MobiDBLite consensus disorder prediction 189 212 - -
Ahy20g3078 797 SMART serkin_6 445 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g3078 797 Gene3D HUPs 10 142 IPR014729 -
Ahy20g3078 797 SMART Ubox_2 732 794 IPR003613 GO:0004842|GO:0016567
Ahy20g3078 797 Pfam Protein kinase domain 447 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g3078 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 563 575 IPR008271 GO:0004672|GO:0006468
Ahy20g3078 797 ProSitePatterns Protein kinases ATP-binding region signature. 451 472 IPR017441 GO:0005524
Ahy20g3078 797 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 24 140 - -
Ahy20g3078 797 Coils Coil 364 398 - -
Ahy20g3078 797 PANTHER OS02G0152300 PROTEIN 18 795 - -
Ahy20g3078 797 Gene3D Phosphorylase Kinase; domain 1 423 517 - -
Ahy20g3078 797 CDD RING-Ubox_WDSUB1_like 733 773 - -
Ahy20g3078 797 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 728 797 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3078 Ahy-Chr20 141439263 141446263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3078 1 796 U-box Gene Family AT4G25160 51.313 0.0 802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Ahy20g3078 Pkinase 6.20E-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3078 - - gsj:114409387 1179.08