Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3072 ATGGCCTCCAAAACAGAAAGTGGGAACTCAGGTGGTACTGATCAATCAGCGCCAAAGAGTACATACAAAGATCCAGATGATGGACGGCAACGATTTTTGCTTGAGTTGGAATTTGTTCAATGCCTTGCTAACCCCACCTATATTCACTATTTAGCTCAAAATCGGTATTTTGAGGATGAAGCTTTCATTGGATACTTAAAGTATCTTCAATATTGGCAGCGCCCTGAGTATATTAAATTTATTATGTATCCTCATTGCCTCTATTTTCTTGAGCTTCTACAGAATGCAAATTTTCGCAATGCAATGGCACACCCTAACAATAAGGAGCTGGCACATAGACAACAATTCTACTTCTGGAAGAACTACAGGAACAATCGGCTAAAGCACATTTTGCCTAGATCACTTCCTGAACCTACTGCCACAACTGCGCCTCCTGCAGCTTCAACTCCGGCTCAGCCACCTGTGACTGCATTGCCACCAGTACCTGCCACAAATGTTGCAGTGACAGGTTCATCTTCTCAAGCCCCTTCTCCAATGCCATATGGTATGCCCCCTGGATCTGGTCTTGCAAAAAATGACATGAGGAATCCTTCAATGGATAGAAGGAAGCGGAAGTGA 618 0.4369 MASKTESGNSGGTDQSAPKSTYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPNNKELAHRQQFYFWKNYRNNRLKHILPRSLPEPTATTAPPAASTPAQPPVTALPPVPATNVAVTGSSSQAPSPMPYGMPPGSGLAKNDMRNPSMDRRKRK* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3072 205 MobiDBLite consensus disorder prediction 1 24 - -
Ahy20g3072 205 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 12 205 - -
Ahy20g3072 205 MobiDBLite consensus disorder prediction 1 19 - -
Ahy20g3072 205 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 17 119 IPR038089 -
Ahy20g3072 205 MobiDBLite consensus disorder prediction 135 205 - -
Ahy20g3072 205 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 12 205 IPR008831 GO:0003712|GO:0006355|GO:0016592
Ahy20g3072 205 Pfam SOH1 30 122 IPR008831 GO:0003712|GO:0006355|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3072 Ahy-Chr20 141376077 141379019 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Ahy20g3072 Med31 1.30E-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3072 K15153 - gmx:100527879 335.109