Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3065 ATGGACAGTATCTTGGGTCTCCTCAAACTTAGGATTAAGAAAGGCATTAATCTCGCAGTTCGAGATACTTCTTCTAGTGACCCTTATGTTGTTGCCAACATAGGGGAACAGAAGCTCAAAACTAAGGTCATCAAAGACAACTGTAATCCAGAGTGGAATGAAGAACTGATTCTTTCTATTAAGGATATTAATACTCCAATAAATTTGACGATTTACGACAAAGACACCTTATCATCGGACGACAAAATGGGTGAGGCGATTATAGAACTGAGGCCTTATCTTCAGTGCTTGGTGATGGGGTTGGAGAGGCTTCCAGATGGGTGCGTGGTGAAGAGGATTCAGCCAAATAGGGTTAACTGCCTTGCTGAAGAGAGCTCTTGCATTTGGCAAGAAGGGACTATAATCCAAGAGATGATCTTGAGATTGAAAAATGTTGAGTGTGGTGAACTTGTTTGTGAAATTGAGTGGGTTGATGTACCTGGTTGTAAGGGTCTAGCAGAGCTACGACCTTAA 513 0.4191 MDSILGLLKLRIKKGINLAVRDTSSSDPYVVANIGEQKLKTKVIKDNCNPEWNEELILSIKDINTPINLTIYDKDTLSSDDKMGEAIIELRPYLQCLVMGLERLPDGCVVKRIQPNRVNCLAEESSCIWQEGTIIQEMILRLKNVECGELVCEIEWVDVPGCKGLAELRP* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3065 170 CDD C2_ArfGAP 5 148 - -
Ahy20g3065 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 1 163 - -
Ahy20g3065 170 Pfam C2 domain 7 92 IPR000008 -
Ahy20g3065 170 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Ahy20g3065 170 SMART C2_3c 7 102 IPR000008 -
Ahy20g3065 170 Gene3D C2 domain 4 162 IPR035892 -
Ahy20g3065 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
Ahy20g3065 170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 158 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3065 Ahy-Chr20 141327822 141330570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3065 38 166 C2H2 Transcription Factor Family AT1G70790 63.359 2.36e-58 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3065 - - gmx:100788395 257.684