Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3062 ATGGTTGGTGCCAATAGAATTGTGAGCTTATTCTTATTTCACTTTTTCTTGGTGACTCAATCAGCACCAACAAAAAATATTGTGAATCAAGTTCCAGGGTTTGATGGAAAACTACCTTCCAAACACTATGCCGGGTATGTGACGGTAGATGAAGATCATGGAAAGAACCTATATTATTATTTTGTTGAATCAGAGTGCGACCCGAAAAAGGACCCGGTGGTTCTATGGCTTAATGGTGGACCCGGTTGTTCCAGCTTCGATGGTTTTGTATATGAGCATGGTCCATTTAATTTTGAGAAACCAAAGGCTAAAGGAGTCTTGCCTAAGTTGACTCTCAACAAATATAGTTGGTCAAAGGTTTCAAATATCATATACTTGGATTCTCCTGCTGGAGTTGGGTTCTCTTACGCAAAAAATGAATCAGCTTATGAAACTGGGGATATAAGAGTTGCCCATGATACACACGTTTTTCTCCTTAAGTGGTTTCAACTGTACCCCGAGTTCCAACACAACCAATTTTTCTTAGCTGGAGAATCATTTGCTGGGATTTATGTGCCTACTCTTGCTAATAACATAGTCAAAGGAATTGAAGATGCAAGGATGCAGCCAATAATAAATTTCAAGGGTTACATGATAGGAAATGGTGTCTGTGATGATAAATTTGATGGCAATGCTCTTGTTCCGTTTGCATATGGGATGGGTCTTATTTCTGAAGAAATATTCAAGGAGACAGAAAGTGTTTGCAAAGGAAGCTACTACAATCCTCAAACTAAGGATTGCGCATCACAGCTTTCTAAAGTAAACCAGCTTATTAGTGGGCTAAACATATATAACATTTTGGAACCATGTTACCATAGCAATGGAACAGACACAAGAAGTACAAGATCTAATAATAATAGGTTGCCAGAAAGCTTTAAGCAATTGGGTGTAACAGAGAGAGCTTTGCCAGTTCGGAAGAGAATGTTTGGTCGTGCATGGCCTTATGGAGCTATTGTCAAAAATGGAATTGTCCCATCTTGGCCACAACTCACCCATGGAGGTCTTGATGTTCCATGCACTGATGATGAAGTTGCTTCCGAATGGTTGAACAATGATGCAGTTAGAAAAGTACTTCACACAGCAGATAAAAGTTTGGTTAAGAAATGGATATTATGCACAGACAAACTGACTTACCACCATCCTCTTGGAAGCATGATCAAGTATCACCAATACCTAACCTTCCGCGGTTATCGAGCACTTATATTTAGTGGTGATCATGACATGTGTGTTCCATACACCGGAAGCCAAGCATGGACAAGTTCATTGGGATATAAGATTATAGATGAATGGAGGCCTTGGTTTGTAGATGGTCAAGTTGCCGGGTTTACACAAGGATACGAATTCAATCTTACATTTTTAACCATAAAGGGAGCTGGCCACACTGTTCCAGAATATAAGCCTAAAGAGTCATTGCACTTTTACAAACAATTTATTCATGGAAAGAAAATATGA 1491 0.3924 MVGANRIVSLFLFHFFLVTQSAPTKNIVNQVPGFDGKLPSKHYAGYVTVDEDHGKNLYYYFVESECDPKKDPVVLWLNGGPGCSSFDGFVYEHGPFNFEKPKAKGVLPKLTLNKYSWSKVSNIIYLDSPAGVGFSYAKNESAYETGDIRVAHDTHVFLLKWFQLYPEFQHNQFFLAGESFAGIYVPTLANNIVKGIEDARMQPIINFKGYMIGNGVCDDKFDGNALVPFAYGMGLISEEIFKETESVCKGSYYNPQTKDCASQLSKVNQLISGLNIYNILEPCYHSNGTDTRSTRSNNNRLPESFKQLGVTERALPVRKRMFGRAWPYGAIVKNGIVPSWPQLTHGGLDVPCTDDEVASEWLNNDAVRKVLHTADKSLVKKWILCTDKLTYHHPLGSMIKYHQYLTFRGYRALIFSGDHDMCVPYTGSQAWTSSLGYKIIDEWRPWFVDGQVAGFTQGYEFNLTFLTIKGAGHTVPEYKPKESLHFYKQFIHGKKI* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3062 496 SUPERFAMILY alpha/beta-Hydrolases 28 494 IPR029058 -
Ahy20g3062 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Ahy20g3062 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Ahy20g3062 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Ahy20g3062 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 463 476 IPR001563 GO:0004185|GO:0006508
Ahy20g3062 496 ProSitePatterns Serine carboxypeptidases, histidine active site. 463 480 IPR033124 GO:0004185
Ahy20g3062 496 Pfam Serine carboxypeptidase 32 493 IPR001563 GO:0004185|GO:0006508
Ahy20g3062 496 Gene3D - 348 496 - -
Ahy20g3062 496 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 14 494 IPR001563 GO:0004185|GO:0006508
Ahy20g3062 496 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 14 494 - -
Ahy20g3062 496 Gene3D alpha/beta hydrolase 20 326 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3062 Ahy-Chr20 141282522 141293352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3062 357 496 Calmodulin-binding Proteins AT2G22960 44.286 3.93e-37 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3062 K16296 - gmx:100792057 704.901