Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3056 ATGGTGAATGCAATAAAGGTAGCGATTGCAGATGCAACGGTGACATGTATGTGGGTATTCATATCAGCGACGTTTGGGATGATGACAAGTTATATAACAAAAATGGTTGATCTTCATCACCTATCACATGGTGGTGTTGATTACCCTGCTATGATGGTAACAACTTTAGTGTTCTTCACATTTTTCTCTATATTCAATACTATTTGCAATGCCTTTGGAGGTGCCAGTTTCAACCCCACTGGTAATGCTTCCTTCTATGCTGCTGGTTCTGGCTCTGACTCCCTTTTCTCCATGGCTCTTCGTTTTCCAGCTCAGGCACTGGGTGCAGTTGGTGGTGCAGTGGCAATCATGGAAGTAATGCCATTAAAATACAGGCACATGATTGGTGGGCCTACTTTGAAAGTTGACTCACAAACTGGAGCAATTGTTGAAGGGGTTTTGACATTTCTGATTACCTTTGTGGTACTTGTAATCTCACTGAAAGGCCCTCGTAGTTCAATCATGAAGACTTGGTTAATCGCCATGGCAGTTGTCATTGTTGTCCATCTCGGTTCTGTTTACACCGGCCCAGCCTTGAATCCTGCCATTGCCTTTGGTTGGGCATACTTAGAGAATTCACACAATACATGGGAGCAATTTTATGTTTATTGGATTGCCCCTTTCATTGGTGCAATATTGGCTTCTTGGTTATTTCGTATTGTCTTTCCACCAAGAGTAGTAAAACACAAGAAAGCTTGA 738 0.4241 MVNAIKVAIADATVTCMWVFISATFGMMTSYITKMVDLHHLSHGGVDYPAMMVTTLVFFTFFSIFNTICNAFGGASFNPTGNASFYAAGSGSDSLFSMALRFPAQALGAVGGAVAIMEVMPLKYRHMIGGPTLKVDSQTGAIVEGVLTFLITFVVLVISLKGPRSSIMKTWLIAMAVVIVVHLGSVYTGPALNPAIAFGWAYLENSHNTWEQFYVYWIAPFIGAILASWLFRIVFPPRVVKHKKA* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3056 245 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy20g3056 245 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy20g3056 245 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy20g3056 245 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy20g3056 245 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy20g3056 245 PANTHER AQUAPORIN SIP1-1 3 245 IPR044222 GO:0015250
Ahy20g3056 245 PANTHER AQUAPORIN SIP1-1 3 245 - -
Ahy20g3056 245 Pfam Major intrinsic protein 3 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy20g3056 245 SUPERFAMILY Aquaporin-like 4 238 IPR023271 -
Ahy20g3056 245 Gene3D Glycerol uptake facilitator protein. 2 244 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3056 Ahy-Chr20 141225160 141228888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3056 2 244 Major Intrinsic Protein MIP AT5G18290 52.653 4.18e-77 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3056 K09875 - gmx:100788738 324.709