Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3055 ATGCTGAAGCGGTTGCCGCACGAGTCGTCCTCCGACAAGATTTACCAGCTACGCGGAGCGCTGATGATGGTGGCCGTTCCTTTGGTGCTCGTCACGATTGTGCTTTACGTGTTGCCTTCCATTTCCTCCAACGAGTCCATCGAAGATTACACCCTCACGCACCGGAAGATTTCGCCCGATAACAGAGCCTCTAGCTCCTACGCCGTCGTCTTCGATGCTGGCAGCTCCGGCAGCCGCGTTCACGTTTTCCACTTCGACCGCAATCTCGACCTTGTTCACATTGGCAAAGATCTCGAGCTATTCGTTCAGATTAAACCAGGTTTGAGTGCGTATGCACAGAATCCACAACAGGCAGCGGAGTCTCTGATTACACTTCTGGACAAAGCTGAAAGTGTTGTTCCTCTGGAGTTTCGCCCCAAAACACCTGTTAGAGTAGGGGCAACTGCAGGATTGAGAGCTTTGGAAGGGGATGCTTCTGACAGGATCTTGGAAGCGGTCAGGGAATTGCTTAAGCAAAGGAGCACTTTGAAATCTGGGCCTAATGCTGTTACTGTGCTGGATGGAACCCAAGAAGGTGCTTTTCAATGGGTGACTATTAACTATTTGCTGGGGAACTTGGGAAAAGATTATTCAAAGACTGTTGGGGTTGTTGATCTTGGAGGTGGATCTGTTCAAATGGCATATGCCATCTCAGAGACAGATTCTGCCAAGGCTCCAAAAGTACTTGGTGGAGAGGATCCATATGTCAAGGAGATGTTTTTAAGGGGAAGAAAATATTACCTCTATGTTCACAGTTACTTGCACTATGGTTTGCTAGCAGCTCGCGCAGAAATTTTAAAGGTTTCTGATGATTCTGGGAACCCGTGTGTTTTAGCTGGCTTTGATGGGTATTACAATTATGGAGGAAAGTCATTCAATTCCTCATCCTCCCCATCTGGCTCAAGATTGAATGAATGCGAAACCATGGCTCTTAAAGCTCTCAAAGTTAATGAGTCAAAATGTACACATATGAAGTGCACATTCGGAGGGATTTGGAATGGTGGTGGCGGGGATGGACAGAAAAACCTTTTTGTTGCCTCATTTTTCTTTGACCGTGCTGCGGAGGCGGGTTTTGCCAATCCAAACTTGCCCGTTGTAAAAGTTCGTCCTGTGGACTTCGAGGTCGCAGCTAAGCGAGCTTGTCAAACAAAACTTGAGGAAGCAAAATCAGCTTATCAACGTGTGGAGGAGGGGAACCTACCATATTTATGCATGGATCTCGTATACCAGTATACATTACTTGTAGCTGGATTTGGTCTAGATCCACGGCAAGAGATTACATTGGTGAAAAAGGTTCAGTACCGTGATGCTCTTGTTGAAGCAGCATGGCCCCTCGGCAGCGCCATAGAAGCTGTGTCATCTTCGTAA 1407 0.4726 MLKRLPHESSSDKIYQLRGALMMVAVPLVLVTIVLYVLPSISSNESIEDYTLTHRKISPDNRASSSYAVVFDAGSSGSRVHVFHFDRNLDLVHIGKDLELFVQIKPGLSAYAQNPQQAAESLITLLDKAESVVPLEFRPKTPVRVGATAGLRALEGDASDRILEAVRELLKQRSTLKSGPNAVTVLDGTQEGAFQWVTINYLLGNLGKDYSKTVGVVDLGGGSVQMAYAISETDSAKAPKVLGGEDPYVKEMFLRGRKYYLYVHSYLHYGLLAARAEILKVSDDSGNPCVLAGFDGYYNYGGKSFNSSSSPSGSRLNECETMALKALKVNESKCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFANPNLPVVKVRPVDFEVAAKRACQTKLEEAKSAYQRVEEGNLPYLCMDLVYQYTLLVAGFGLDPRQEITLVKKVQYRDALVEAAWPLGSAIEAVSSS* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3055 468 CDD NBD_sugar-kinase_HSP70_actin 69 228 - -
Ahy20g3055 468 PANTHER APYRASE-LIKE PROTEIN 2 467 - -
Ahy20g3055 468 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 186 201 IPR000407 GO:0016787
Ahy20g3055 468 Gene3D - 67 462 - -
Ahy20g3055 468 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 2 467 IPR000407 GO:0016787
Ahy20g3055 468 Pfam GDA1/CD39 (nucleoside phosphatase) family 63 466 IPR000407 GO:0016787
Ahy20g3055 468 Gene3D Exopolyphosphatase. Domain 2 187 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3055 Ahy-Chr20 141218440 141223227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3055 7 467 Calmodulin-binding Proteins AT3G04080 68.113 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3055 K14641 - gmx:100804818 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3055 20 141218440 141223227 Ahy10g2492 10 114429505 114434409 hybridization