Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3044 ATGGATTTCACAGCGGAGAAGAAGGAATTGGAGAGCAACAACAACAACACTAACTCTGACACTGCTCAGCGAACCCTAGATTCTTCTTCCGAAGTCGAGGAGCGCCATGCTCGTGATCTTAAAGCTGGTCTTCACCCTCTAAAGCACAAATTTGTATTTTGGTACACACGGCGAACACCAGGAGTTCGAAATCAAACATCATATGAGGATAACATTAAGAAGATTGTTGATTTCAGTACTGTTGAAGGATTTTGGGTTTGCTATTGCCATCTTGCTCGACCTTCTTCTTTGCCTAGTCCAACAGATTTGCATCTTTTTAAGGAAGGAATCCGACCCCTTTGGGAGGACTCTGCTAACTGCAATGGTGGTAAATGGATTATACGGTTCAAAAAAGCTGTCTCGGGTCGTTTTTGGGAGAACCTGGTTCTTGCCTTAGTAGGTGACCAATTGGATTATGGAGATCAGATATGTGGTGCAGTACTTAGCATTCGTTTTAATGAAGATATACTTAGCGTCTGGAATCGCAACGCTTCTGACAATCAGGCTGTAATGGCTCTCAGAGATTCCATTAAGCGCCATTTAAAGCTTCCTCATGGCTATATTATGGAGTACAAGCCCCATGATGCCTCCCTAAAGGACAATTCATCTTACAGGAACACTTGGTTGAGAGGCTAG 675 0.4341 MDFTAEKKELESNNNNTNSDTAQRTLDSSSEVEERHARDLKAGLHPLKHKFVFWYTRRTPGVRNQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKAVSGRFWENLVLALVGDQLDYGDQICGAVLSIRFNEDILSVWNRNASDNQAVMALRDSIKRHLKLPHGYIMEYKPHDASLKDNSSYRNTWLRG* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3044 224 ProSitePatterns Eukaryotic initiation factor 4E signature. 102 125 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Ahy20g3044 224 SUPERFAMILY eIF4e-like 23 220 IPR023398 -
Ahy20g3044 224 MobiDBLite consensus disorder prediction 10 26 - -
Ahy20g3044 224 Pfam Eukaryotic initiation factor 4E 46 204 IPR001040 GO:0003723|GO:0003743|GO:0006413
Ahy20g3044 224 PANTHER BNAA10G16710D PROTEIN 26 224 - -
Ahy20g3044 224 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 26 224 IPR001040 GO:0003723|GO:0003743|GO:0006413
Ahy20g3044 224 MobiDBLite consensus disorder prediction 1 32 - -
Ahy20g3044 224 Gene3D RNA Cap, Translation Initiation Factor Eif4e 7 219 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3044 Ahy-Chr20 141142550 141145584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3044 15 224 Eukaryotic Initiation Factors Gene Family AT5G18110 77.143 6.13e-123 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3044 K03259 - gmx:100499744 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3044 20 141142550 141145584 Ahy10g2481 10 114373556 114376600 hybridization