Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3013 ATGGCAAAAACACTTCATCCTTCAATGCTTCTCATTCTGGTAACAATTACACTCTCAATTCTCGATTCCGAGCAACAACGAATTCAATCAACGCAATCTAAGGCGCTTCTAACAATCCAACGGCTATTAAACTTCCCTGCTGTTTTAAGCAGCTGGAATAGCAGCACAGACTTCTGCAGCTCAGATTCAAAAACTTCTCTAACTGTTGTGTGCTATGAAGGCACCATAACTCAGCTTAATATCGTAGGCGAAGCGAAAGCTTCGCCTCTTCCGAAAACTTTCTCAGTTGATTCCTTTGTCAAAGCACTGGTAAAGTTTCCTACATTGAAAGTACTCACACTGGTTTCTCTTGGCATTTGGGGTCCCTTGCCTGCTAAGATAGCTCGTTTGTCGTCGCTCGAGATACTTAATCTGAGTTCAAATTTTCTCTGTGGCGCCATCCCTCCCGAGCTTGCTTCGCTTTCACATCTACAAACACTAATTCTTGATGACAACATGTTTGCCAGCCGTCTTCCGGACTGGCTGGATTCCTTCCCGGCCTTAACCGTGCTGAGTTTAAAGACTAATTCATTCAACGGTTCTCTTCCTGATTCGCTCGGTCAGTTAGAGAATCTGCGCGTTCTTTCGCTTTCTCATAACAGGTTTTATGGAGCAGTACCTGATTTAAGCCGGTTGGTGAATCTAGAAGTGCTGGAATTGGATGAGAATGCTTTTGGACCTGACTTTCCGAAGCTTGGAAACAAGTTGGTTACTTTAGTGCTAAGAAACAACAAGTTTAGATCTAATATCCCTGATGAATTAAGCTCATACTATCAGCTCGAACGATTCGATATCTCTTCGAATTCTTTCGTTGGGCCCTTCCAGCTGCAACTGTTATCACTTCCATCTATTACTTATCTAAACATTTCTGGAAACAGATTAACAGGAATGCTTTATGATAATGTTTCTTGCAACTCTCAACTCCAAGCAGTGGATTTATCCTCAAATCTTTTGGCTGGAAGCTTACCAAAATGTTTGGAGTCGAATTCGAATGGAAGGAGTGTCCGGTATGCTGGGAATTGTCTCGAGGAGACGGATCGAGATCAACACGAATCGTCGTTTTGCCACACTGAAGCCATAGCAGTTGGAATATTGTTACCTGAAAGGAAGAGGCACAGAAGAGTGTCTAAGGCAGTTCTTTCAAGTGTGATAGTTGGTGGAATTTTTGGAGTTGTAGCTGTTTTTTCATTGATTTTGTTTATTGTTAGAAGAGGAAATTCCAAAAGCAGAGTGAAGAAGAATCCTCCAACGAAATTGATATCAGAAAATGCAGCTTCTGGATACACCACTAAGCTACAATCTGATGCAAGGTATGTATCTCAAACAATGAAGTTCGGATCTGTTGGTCTGCCACCTTATCGAGCTTACTCACTGGAAGAGATTGAGGTAGCTACAAACAATTTTGACTCAGCTCGTTTCATGGGTGAAGGTTCTCAAGGACAGATGTACAGAGGTCAACTTAGGGATGGTTCACTTGTTGCCATAAGATGTGTGAAAATGAGAAAATGCTTCAGCACTCAAGACTTTATGCACTACATAGAGCTGATATCAAAGTATAGGCATCTCCACTTAGTCAGTGCCCTTGGACACTGCTTTGAATGCTATTTAGATGATTCAAGTGTCAGCAGAATATTCCTTGTCTTTGAATATGTACCCAATGGCACACTCAAGAGCTGGATCTCAGATGGACATTATAGAAAATCACTGAGCTGGACACAACGGATAGCAGCTTCAATTGGAGTAGCAAAGGGAATTGAATTTTTGCATACAGGACTTGTCCCTGCTGTATTCTCAAACAATATAAAGATAACTGATGTTTTATTGGATCAGAATTTTGTTGCAAAAATCAGCAGTTACAACCTACCTTTGTTATCTAATATTGTAAAGAGTGGAAGTGGAAATCTTTCCATTGGATTCAGAAGTCCAAGCTTTAAACAAAGTTTAAGACATGAAGATAAGTCAGATATTTATGACTTTGGAGTAATTCTACTGGAACTCATTCTTGGAAGGACAATAAAACCAAGGAATGTAGACACCTTAAAGGACCTGTTGCAAGCAAGCATAACATCAAACGATGAAGCTCGAATGAGCATCATAGATCCGGCGATTCGCAAGGCGTGCTTGGATCAATCACTGAAGACAATGATGGAAGTGTGTGTGAGGTGCCTGGCTAAAGATCCATCAGAGAGACCCTCAATCGAGGATGTTCTATGGAACTTGCAGTTTGCTGCTCAAGTCCAAGATGCATGGAGAGTTGACTCTCAAAGTCAAAGCAGTGATGGCTCTCCCATATCACCTTTGGCGTCGCGACCAATGAACTTCCATTAG 2367 0.4153 MAKTLHPSMLLILVTITLSILDSEQQRIQSTQSKALLTIQRLLNFPAVLSSWNSSTDFCSSDSKTSLTVVCYEGTITQLNIVGEAKASPLPKTFSVDSFVKALVKFPTLKVLTLVSLGIWGPLPAKIARLSSLEILNLSSNFLCGAIPPELASLSHLQTLILDDNMFASRLPDWLDSFPALTVLSLKTNSFNGSLPDSLGQLENLRVLSLSHNRFYGAVPDLSRLVNLEVLELDENAFGPDFPKLGNKLVTLVLRNNKFRSNIPDELSSYYQLERFDISSNSFVGPFQLQLLSLPSITYLNISGNRLTGMLYDNVSCNSQLQAVDLSSNLLAGSLPKCLESNSNGRSVRYAGNCLEETDRDQHESSFCHTEAIAVGILLPERKRHRRVSKAVLSSVIVGGIFGVVAVFSLILFIVRRGNSKSRVKKNPPTKLISENAASGYTTKLQSDARYVSQTMKFGSVGLPPYRAYSLEEIEVATNNFDSARFMGEGSQGQMYRGQLRDGSLVAIRCVKMRKCFSTQDFMHYIELISKYRHLHLVSALGHCFECYLDDSSVSRIFLVFEYVPNGTLKSWISDGHYRKSLSWTQRIAASIGVAKGIEFLHTGLVPAVFSNNIKITDVLLDQNFVAKISSYNLPLLSNIVKSGSGNLSIGFRSPSFKQSLRHEDKSDIYDFGVILLELILGRTIKPRNVDTLKDLLQASITSNDEARMSIIDPAIRKACLDQSLKTMMEVCVRCLAKDPSERPSIEDVLWNLQFAAQVQDAWRVDSQSQSSDGSPISPLASRPMNFH* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3013 788 Gene3D Ribonuclease Inhibitor 247 375 IPR032675 -
Ahy20g3013 788 MobiDBLite consensus disorder prediction 766 788 - -
Ahy20g3013 788 ProSiteProfiles Leucine-rich repeat profile. 204 226 IPR001611 GO:0005515
Ahy20g3013 788 Gene3D Ribonuclease Inhibitor 29 246 IPR032675 -
Ahy20g3013 788 Gene3D Phosphorylase Kinase; domain 1 441 563 - -
Ahy20g3013 788 Pfam Protein tyrosine and serine/threonine kinase 485 750 IPR001245 GO:0004672|GO:0006468
Ahy20g3013 788 ProSiteProfiles Protein kinase domain profile. 481 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g3013 788 SUPERFAMILY L domain-like 34 356 - -
Ahy20g3013 788 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 6 771 - -
Ahy20g3013 788 SMART LRR_typ_2 154 178 IPR003591 -
Ahy20g3013 788 SMART LRR_typ_2 202 225 IPR003591 -
Ahy20g3013 788 SMART LRR_typ_2 130 153 IPR003591 -
Ahy20g3013 788 SMART LRR_typ_2 294 318 IPR003591 -
Ahy20g3013 788 SUPERFAMILY Protein kinase-like (PK-like) 461 755 IPR011009 -
Ahy20g3013 788 Pfam Leucine rich repeat 155 215 IPR001611 GO:0005515
Ahy20g3013 788 Gene3D Transferase(Phosphotransferase) domain 1 564 773 - -
Ahy20g3013 788 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 6 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3013 Ahy-Chr20 140907124 140911553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3013 45 782 Miscellaneous Gene Families AT3G03770 62.046 0.0 885
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Ahy20g3013 PK_Tyr_Ser-Thr 6.60E-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3013 - - gmx:100813207 1161.75