Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3012 ATGGCTGAGCCACAAGGCGGTGGTGCTGAAGGAAGCAGGCGTAGAAGCACTAGTGCCGCAAGGCGTGGCGCGGCGGCGCCAACGCAAGAGGGAGCGCCGCCGCCATCTCCGAGTAGTCCATGCGGGGCTTGCAAGTTCTTGAGGAGGAAGTGTGTTGCAGGGTGCATCTTTGCACCCCACTTTAGCTCGGACCAAGGTGCCGCTAAGTTTGCGGCGGTTCACAAGGTGTTTGGTGCTAGCAATGTGTCGAAGCTTTTGTTGCATGTTCCGGCACACCGCCGCAATGAAGCGGTGGCGACTATTTGTTACGAGGCTCAGGCAAGGCTATCTGATCCGGTTTATGGTTGTGTGTCCACCATTCTCTCTTTGCAACAACAGGTGGCATCTTTGCAAGCAGAGGTGGCTATGACTCAAACTCAAGTGATGAATGGAAGGATTGCATATGCAAGTGTTCTTGACACCACCCAGCAGCAGCAGCAGCCGCAACAACAAGCACTACAGCATCACCACCCAAACATGATGATCAACAATTTGGGGCTGTATCCAGCATTCTCAAACAGCTCATCTGCCTCCACAACTAACCTTATGAACATCACCAACTTCAACCCTGCTACCGGTGGTTTCGACCTCTCAATGGAGGCGGCAACAGCACCCTCATCGTCTCACAGCATTCATCCACTTCATCATAATAGCAATTTCTCTCGCTTGTCTCAATATGATGATGATGATGAACAAGAAAGCAAGATTCCTCCGGTCTTTAACCCTGATCTGTAG 774 0.5181 MAEPQGGGAEGSRRRSTSAARRGAAAPTQEGAPPPSPSSPCGACKFLRRKCVAGCIFAPHFSSDQGAAKFAAVHKVFGASNVSKLLLHVPAHRRNEAVATICYEAQARLSDPVYGCVSTILSLQQQVASLQAEVAMTQTQVMNGRIAYASVLDTTQQQQQPQQQALQHHHPNMMINNLGLYPAFSNSSSASTTNLMNITNFNPATGGFDLSMEAATAPSSSHSIHPLHHNSNFSRLSQYDDDDEQESKIPPVFNPDL* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3012 257 Coils Coil 120 140 - -
Ahy20g3012 257 MobiDBLite consensus disorder prediction 217 234 - -
Ahy20g3012 257 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 13 247 - -
Ahy20g3012 257 MobiDBLite consensus disorder prediction 217 257 - -
Ahy20g3012 257 Pfam Lateral organ boundaries (LOB) domain 40 138 IPR004883 -
Ahy20g3012 257 MobiDBLite consensus disorder prediction 1 39 - -
Ahy20g3012 257 MobiDBLite consensus disorder prediction 235 249 - -
Ahy20g3012 257 ProSiteProfiles LOB domain profile. 39 141 IPR004883 -
Ahy20g3012 257 PANTHER LOB DOMAIN CONTAINING PROTEIN 13 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3012 Ahy-Chr20 140900938 140903365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3012 1 247 AS2 family AT3G03760 49.042 3.13e-65 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy20g3012 LOB 2.80E-38 No_clan