Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3008 ATGATTCTATTTGAAAATGGTTGGAAAGAATTTGCTTCATATTACTCTTTGGATAATGGCCATATGCTGTTCTTTGCGTACTACAATGAAACTTCTAACATTGAAGTACACATTCATGACATCATTAGTGGCTTTGAAATAAACTATCCTTCCTTGGATCACATCAGCCATGACAATTCGATTAAGATCTTGAATGAACTGCCGCCACGAGGCTGGCCGAGGAAAAAAGTGAAAGCAGCAGCAGAAGTATCATCTCCTTCTACAAGTAAAAGATTGAGGAGTTCTGTCAAAACTGGAGATGTAGAAAAGGGCCCTGATAAACAAAACTGGATGCAGTGTTGCAAGAATGAAGAAGCTAGTCAATCTGAAGAGACAGGTCTTAAGATGCCAACAATTCAAAGTGCCAGAGTTGATCCTGATAGTATGTAA 429 0.3869 MILFENGWKEFASYYSLDNGHMLFFAYYNETSNIEVHIHDIISGFEINYPSLDHISHDNSIKILNELPPRGWPRKKVKAAAEVSSPSTSKRLRSSVKTGDVEKGPDKQNWMQCCKNEEASQSEETGLKMPTIQSARVDPDSM* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3008 142 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 2 124 - -
Ahy20g3008 142 ProSiteProfiles B3 DNA-binding domain profile. 1 42 IPR003340 GO:0003677
Ahy20g3008 142 MobiDBLite consensus disorder prediction 75 142 - -
Ahy20g3008 142 Gene3D - 1 41 IPR015300 -
Ahy20g3008 142 PANTHER B3 DOMAIN-CONTAINING 2 124 - -
Ahy20g3008 142 SUPERFAMILY DNA-binding pseudobarrel domain 3 40 IPR015300 -
Ahy20g3008 142 MobiDBLite consensus disorder prediction 113 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3008 Ahy-Chr20 140879694 140880845 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3008 2 66 B3 DNA Binding Superfamily AT1G49475 41.538 2.72e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3008 - - aip:107622420 293.508