Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3001 ATGGGTCACTACACTTTGTTGTTGAACACTTGTTTTCTTATAGTGGTGTGTGCCTTCATGGTTGTTCATTTGCAACTTCCTGAAGTTGTCGATGTGGACAACCACACCGACAACTCTTTCTCTAACATAACAACCGACCAAGATTGCAACAGTTTGCACAACCATGACGACTACAAACACAAGTGTCTGTACCTCAAATCCAACGATCCATGCGTGTCTCAGGGCTACATCGATTACCTTTTCTTCTTCTATTGCAAGCTTGGGAGGTTCCCTCTTTTAGGTTACACTCTATTGATACTTTGGCTCCTTGTTTTGTTTTACATGTTGGCAAACACTACTTGTCAGTATTTTTGTCCTTCACTTGAAAATCTTTCAAAGTTTCTCAGGTTGTCGCCAACAATTGCTGGGGTGACTCTTCTCTCCCTTGGCAATGGTGCCAGTGATGTCTTCTCAAGCCTTGTTTCTTTCCAAGGTAGTGGGACCCAAAGCATTGGCTTCAACACTGTTCTTGGTGGGGTTTCTTTTGTCACTTGTGTTGTTGTGGGCCTAGTTAGCATTTCAATACGTAACAAGAGTGTTGGGGTTATCAAATCTGCGTTTGTGAGGGATGTTTGCTTTCTCTTTCTCGTTCTTTTGTTCTTGTTTAGCATCTTGATCAGTGGTGAGATCAATGTTCTTGGTGCAGTTGGTTTTACTCTTTTGTATGGGTTGTATGTGGTTGTTGTTTACGTGTCTTCCACGCGATGGAAGGATGGTTGTGGTGGCGAAGGGGTTGTCGGGGTTGTCGGGGTTGATGGTGTTGCTGATATTGCTGAAAATCTGAACGTGCAGCTTCTGAATTCCATTGAGAAAGGTTTTATTGATGAAAATGAAATGAATGATGTTAAAGAAAAGAGGAACTGGTGTTTGGGATCTTCAATATGGCGAAATTCCCTTTATGCCCTTGAGATGCCACTTTACTTGCCAAGGAGGTTGACAATTCCGGTTGTTTGTGAAGAAAATTGGTCAAAGCCATTTGCTGTGGGTTCAGTGATTTTGGCACCGGTTCTGTTATGTGTAATTTGGGTTCCTTTTAATCGAGAAAATTTTATGAACACCTTTATGATCTATGGGATCGGTTTATTAATTGGAATTGTACTTGGAATAGCGGCAATTTTAACTACAAATATGTCGGCGCCGCCGCCGCGGAAGTGGTTGTTTCCGTGGCTTGCCGGAGGGTTTCTGATGAGTGTGACTTGGAGTTACATTTCAGCTCAAGAATTGGTAGGGTTGCTAGTTTCAATTGGATACATTTGTGGAATTAGTCCTTCAATTCTAGGGTTAACGGTTCTTGCTTGGGGGAATTCACTTGGGGATTTAATGACGAATTTAACCCTGGCTATAAATGGTGGATCTGAGGGTGCTCAAATTGCAATTTCAGGTTGCTATGCTGGCCCAATATTTAATACTCTTGTTGGGTTGGGTTTGTCTCTTGTTACTTGCACTTGGTCACAGTACCCACAAAATGTTGTCATCACTAAAGATTTATATCTATGGGAGACAATGGGATTTTTGGTCATTGGATTAATTTGGGCACTTGTGGTTTTGATTAGAAAAGATATGAAACTTAATGGACTTTTGGGAGTGGGGCTTTTGGTAATTTACTTCGTTTCTCTATTTCTGAGGCTAGTTCAGACTAAAGGGTCTCTAGATCTAGACCAATTCTAA 1707 0.4148 MGHYTLLLNTCFLIVVCAFMVVHLQLPEVVDVDNHTDNSFSNITTDQDCNSLHNHDDYKHKCLYLKSNDPCVSQGYIDYLFFFYCKLGRFPLLGYTLLILWLLVLFYMLANTTCQYFCPSLENLSKFLRLSPTIAGVTLLSLGNGASDVFSSLVSFQGSGTQSIGFNTVLGGVSFVTCVVVGLVSISIRNKSVGVIKSAFVRDVCFLFLVLLFLFSILISGEINVLGAVGFTLLYGLYVVVVYVSSTRWKDGCGGEGVVGVVGVDGVADIAENLNVQLLNSIEKGFIDENEMNDVKEKRNWCLGSSIWRNSLYALEMPLYLPRRLTIPVVCEENWSKPFAVGSVILAPVLLCVIWVPFNRENFMNTFMIYGIGLLIGIVLGIAAILTTNMSAPPPRKWLFPWLAGGFLMSVTWSYISAQELVGLLVSIGYICGISPSILGLTVLAWGNSLGDLMTNLTLAINGGSEGAQIAISGCYAGPIFNTLVGLGLSLVTCTWSQYPQNVVITKDLYLWETMGFLVIGLIWALVVLIRKDMKLNGLLGVGLLVIYFVSLFLRLVQTKGSLDLDQF* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3001 568 Pfam Sodium/calcium exchanger protein 403 556 IPR004837 GO:0016021|GO:0055085
Ahy20g3001 568 Pfam Sodium/calcium exchanger protein 99 243 IPR004837 GO:0016021|GO:0055085
Ahy20g3001 568 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 3 563 - -
Ahy20g3001 568 Gene3D - 130 276 IPR044880 -
Ahy20g3001 568 Gene3D - 339 557 IPR044880 -
Ahy20g3001 568 PANTHER CATION CALCIUM EXCHANGER 3 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3001 Ahy-Chr20 140742575 140744847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3001 34 561 Antiporters AT5G17850 52.710 9.76e-167 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3001 K13754 - gmx:100813848 685.641