Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2978 ATGGCTGCCGAAGCTGTTTTGTCTTCCGTTCTTAGTGTTGTTTTTGACAGGATGTCCTCTCCTGAAGTTGTTAACTGGATCAAAGGGAAGAAACTTACTCAGAACCTGATTGAAAGGTTGAAGACTAATCTTTATGCTGTTCAAGCCTTTCTCATCGATGCTGAGCAGAAGCAGATCAAGGAGAGACCTGTCAAGGACTGGCTTGATAGTCTCAAACATGCCATGTATCTTGCTGATGACTTGCTTGATGAAGTCTTCACCAAAGCTGCCACTCAGAAGGATCCAGGTACCTTCCTCTCTCGTTTTCTCAATTTGAAAGATAGGGATGTAGCAAACAGGATGGAGGAAGTCATTGATAGGATAGAGTCTCTTGTGATTCAAAAAGACACTCTTGGTCTCAGAGAGATTCCTAAGGAGAACATGTCATGGAGGATCACTACATCTCTAGTTGAAACATCTGATGTATGTGGCAGGGAAGAAGACAAGGAGGCCATAGTAAAACTGTTGTTGGATGATGATGGTGATGATGATACTGGTGGTCATAGTGATGTATCTGTGATTCCCATTGTGGGCATGGGTGGGATAGGAAAGACTACTTTGGCCCAATTGGTTTACCAGGATGGCAAAGTGAAGGAGAATTTTGATTTTCAAGCTTGGATTTGTGTGTCAGAAGAGTTTGATGTTTTCAAGGTCACCAAGACTATAATCGAGGCAATAACTAAAAGTTTTTGCAGCTTGACAGATTTGAATTTGCTTCAGCATGATTTAAAAGAAAAGTTGTCAAGGAAGAAGTTCTTTGTTGTCTTGGACGATGTATGGAGTGAAAGTTACGAAGATTGGGATAAACTTCTAAAACCTTTTCGCAAAGGGGTTAAGGGAAGTAAAATTCTCATAACTACTAGAAGTAAAAGAGTGGCTTCGGTGGTGCAAACTGTTTCACCTTATGAACTGAGCTTATTGTCTGAGGAAGATTGTTGGTTAGTGTTTTCAAAACATGCACGACTCTCAACTGGTTCTATGGAGAATCCAACCTTGAGAAAAGTTGGCAGAGATCTCGTAAAGAAGTGTGATGGATTGCCCTTGGCAGCTCAAGCCCTTGGAGGCTTATTGCGCGGAAATTCTGATGTCAAGTATTGGAATCATTTATTGAAGAGTGAGATCTGGGAACTCTCCCATGTTAAGATAAAGGTTGTTCCTGCATTAAAAATCAGTTATTACTATCTTCCTTCTTATTTAAAGGAGTGCTTTGTTTATTGTTCTTTGTATCCCAAAGACTATGAATTTAGCAAAGAGGAATTGATATTGCTTTGGATGGCAGAGAATTTTTTGCAATCAGCAGGAAAAAAGACTCCAGAAGAAGTTGGTGAGGAATATTTTGACGAATTAGTTGCGAGATCATTTTTCCAACCTCATAGTACTCTTGAAAACATATTTGTGATGCATGATCTGGTGCATGATTTGGCAATGATATTTGCTGGAGAATTCTATTTCAGGGCTGAAGAGTTTGAGAATGCAGTTGAGGTTGATATTAAAACTCGCTATTTGTCACATAATGCCAAAGGCAATTATCCAATCTCAAAACTTTTGGGAGTTTGTGACCGAGTAAAACATACAAGGACATTTCTTGAAATCAATTTGGAGCGAGAGGTTCCATTTAACATGGAAAATGCACCTTATATCTTGTTGTCAAAGTTGAAGTACCTGAGGGCTTTGTCATTCAAATTCTATCCGCTCGAGTCATTGCCTGATTCAATAGGCAAGTTGATTCATTTGCGTTACTTGGATTTGTCTTGGACCTGCATCATGACATTGCCGGATACACTTCGCAACTTGTATAATTTACAGACATTGAAGCTGGTTGGATGTAGGAAACTAAAAGCCCTTCCTGTTGGCATGAAAGATCTTACAAATTTGCGTTACCTTGATATTAGATGGACTGGTTTGCAGGAGATGCCAGAAGGCATGAGCAAATTGACAAGTTTGCAGGTTTTAAGCAACTATATTGTTGGGGAGCGTGAAGGAAACAAGATTAATGAATTGGGAGCACTTGCAAATCTACACCAAACAATTTCGATTGACAAATTGGAGAATGTGGTCAATAGCAGCGAAGCTTTGGAGGCAAGAATGTTTGATAAGGATGGCATTGAATCTTTGATCTTGAAGTGGTCGCCAGATGAATACGAGAATATAGTTGATTCTCAAATTGAAAGAGATATACTTGAAGAGTTACGACCTCATAGTAATTTGAAACAACTACAAATTTGTGGTTACAGGGGTACAACATTTCCAGATTGGTTGGGACATTGTTCTTACCACAACATCACCCAAATAACACTCGGCGGTTTTTTTTCGGGTTATTTCAAGAATTGTTGTATGCTTCCTTCACTTGGACAGCTGCCCTCTTTGAAGCTTCTGGAAATTTCAAAGTTTGAAAGGCTTGCTATTGTGGGGGCTGAGTTTTACCGAAATGATGCATCTTGTATGGAGACTCCATTTCCAATGCTTGAAACTCTTATATTTGAGTCAATGCCTTGCTGGAAGGAATGGCGTTCGTTGGAGTTCAATGCATTTCCTCGACTTAGGAAGCTTATCATATGGGATTGTCCCATGTTGAGCGGAGATTTGCCAAATCAACTACCATCTTTGCAATCACTTGATATTGAGAATTGCAAGCTGCTCAGTTGTTGTGTTCCAAGAGCTGCCGCGATTACCTCTTTACGCATAGAAGGAAGCAAAAAAGTGAGAATTGGGGAGCTACCTCCTTTGCTGGATAATCTATCAATTAATGGAAAGCATCAAGTGGAGTCGGTGAAGGAGGCCATTGCGCACACCCAACTCACTTGCCTCACATCTTTATCCATCTCAGGTTGTTCATCCCGCGTATTGTTTCCAGTGAGTAGTATTCCCGCATCACTACAAGATCTGACGATATGGAATTGCAAAAAATTAGAATTCGAAATGGAAGGCCAACACCACTCGTTGCTTGATCTAACGATACATAACAGCTGTGATTCGGTTACATCCTTCTCGCTGGATTCCTTTCCAAATCTCGTGGGTGTTGAAATCAGCCAGTGTGAAAAGATGGAGTCTCTCGTGGTGTCACCTCAGCTAGAAAATCTCAGATTACTTGGTTGCCCAGAGATAGATTTGTGTGCTACAGGGGATCCACACAGTAGCTTGAGATATCTTATCATCAGCTACTGCGAGAAACAACTCAGCTGTGTAGCATCGCTGTTTCATGGGCTTACTCATCTTCATATTGAAGGTGAATGTGAGAGTGTGAAGTATCTCCCTAAGGAAGGTTGGTTGCCTGCCACCCTTGAGTCTCTCACATTGGATGGCATTAAAAGTGTGGAGATGTTGGAATGCAAGGGACTTGCCCACCTCACCTCCCTCCAACAATTATCTATTCATCATTGTTCCAATATGGAGAACATTGACGGAGAAAAGCTGCCTTCCTCTCTGTTGCGACTCAGCATCTATGGAAGCCCTTTGGGGAAACGGTGTGAGAAGAAGGACCCGCAGGTTTGGCCCAAAATTTCCCACATCCCCGCCATTCAAGTTGATGCCAGATGGATTTCGTAA 3585 0.4123 MAAEAVLSSVLSVVFDRMSSPEVVNWIKGKKLTQNLIERLKTNLYAVQAFLIDAEQKQIKERPVKDWLDSLKHAMYLADDLLDEVFTKAATQKDPGTFLSRFLNLKDRDVANRMEEVIDRIESLVIQKDTLGLREIPKENMSWRITTSLVETSDVCGREEDKEAIVKLLLDDDGDDDTGGHSDVSVIPIVGMGGIGKTTLAQLVYQDGKVKENFDFQAWICVSEEFDVFKVTKTIIEAITKSFCSLTDLNLLQHDLKEKLSRKKFFVVLDDVWSESYEDWDKLLKPFRKGVKGSKILITTRSKRVASVVQTVSPYELSLLSEEDCWLVFSKHARLSTGSMENPTLRKVGRDLVKKCDGLPLAAQALGGLLRGNSDVKYWNHLLKSEIWELSHVKIKVVPALKISYYYLPSYLKECFVYCSLYPKDYEFSKEELILLWMAENFLQSAGKKTPEEVGEEYFDELVARSFFQPHSTLENIFVMHDLVHDLAMIFAGEFYFRAEEFENAVEVDIKTRYLSHNAKGNYPISKLLGVCDRVKHTRTFLEINLEREVPFNMENAPYILLSKLKYLRALSFKFYPLESLPDSIGKLIHLRYLDLSWTCIMTLPDTLRNLYNLQTLKLVGCRKLKALPVGMKDLTNLRYLDIRWTGLQEMPEGMSKLTSLQVLSNYIVGEREGNKINELGALANLHQTISIDKLENVVNSSEALEARMFDKDGIESLILKWSPDEYENIVDSQIERDILEELRPHSNLKQLQICGYRGTTFPDWLGHCSYHNITQITLGGFFSGYFKNCCMLPSLGQLPSLKLLEISKFERLAIVGAEFYRNDASCMETPFPMLETLIFESMPCWKEWRSLEFNAFPRLRKLIIWDCPMLSGDLPNQLPSLQSLDIENCKLLSCCVPRAAAITSLRIEGSKKVRIGELPPLLDNLSINGKHQVESVKEAIAHTQLTCLTSLSISGCSSRVLFPVSSIPASLQDLTIWNCKKLEFEMEGQHHSLLDLTIHNSCDSVTSFSLDSFPNLVGVEISQCEKMESLVVSPQLENLRLLGCPEIDLCATGDPHSSLRYLIISYCEKQLSCVASLFHGLTHLHIEGECESVKYLPKEGWLPATLESLTLDGIKSVEMLECKGLAHLTSLQQLSIHHCSNMENIDGEKLPSSLLRLSIYGSPLGKRCEKKDPQVWPKISHIPAIQVDARWIS* 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2978 1194 Gene3D - 140 313 IPR027417 -
Ahy20g2978 1194 Gene3D - 319 403 IPR042197 -
Ahy20g2978 1194 Pfam Rx N-terminal domain 6 95 IPR041118 -
Ahy20g2978 1194 PRINTS Disease resistance protein signature 186 201 - -
Ahy20g2978 1194 PRINTS Disease resistance protein signature 877 893 - -
Ahy20g2978 1194 PRINTS Disease resistance protein signature 356 370 - -
Ahy20g2978 1194 PRINTS Disease resistance protein signature 259 273 - -
Ahy20g2978 1194 Pfam NB-ARC domain 182 384 IPR002182 GO:0043531
Ahy20g2978 1194 Gene3D - 404 489 IPR036388 -
Ahy20g2978 1194 Gene3D - 24 107 - -
Ahy20g2978 1194 Gene3D Ribonuclease Inhibitor 543 718 IPR032675 -
Ahy20g2978 1194 Gene3D Ribonuclease Inhibitor 719 902 IPR032675 -
Ahy20g2978 1194 Gene3D Ribonuclease Inhibitor 903 1183 IPR032675 -
Ahy20g2978 1194 PANTHER DISEASE RESISTANCE PROTEIN RP 30 959 IPR044974 GO:0006952
Ahy20g2978 1194 SUPERFAMILY RNI-like 849 1167 - -
Ahy20g2978 1194 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 419 IPR027417 -
Ahy20g2978 1194 SUPERFAMILY L domain-like 479 901 - -
Ahy20g2978 1194 PANTHER OS05G0414200 PROTEIN 30 959 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2978 Ahy-Chr20 140531148 140535922 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2978 183 665 WRKY Transcription Factor Family AT5G45050 23.475 4.36e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2978 - - adu:107472405 1571.99