Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2975 ATGGCTGCAGAAGCTGTTTTGTCTTCCGTTCTTAGTGTTGTTTTTGACAGGATGTCCTCTCCTGAAGTTGTTAACTGGATCAAAGGGAAGAAGCTTACTCAGAACCTGATTGAAAGGTTGAAGACTAATCTTTTTGCTGTTCAAGCCTTTCTCATTGATGCTGAGCAGAAGCAGATCAAGGACAGACCTGTCAAGGACTGGCTTGATAGTCTCAAACATGCCATGTATGTTGCTGATGACTTGCTCGATGAAGTCTTCACCAAAGCTGCCACTCAGAAGGATCCAGGTACCTTCCTCTCTCGTTTTCTCAATTTGCAAGATAGAGATGTAGCAAACAAGATGGAGGATGTCATTGATAGGATAGAGTCTCTTGTGATTCAAAAAGACACTCTTGGTCTCAGAGAGATTCCTAAGGAGAACATGTCATGGAGGATCACTACATCTCTAGTTGAAACATCTGATATATGTGGCAGGGAAGAAGACAAGGAGGCCATAGTAAAACTGTTGTTGGATGATGATACTGGTGGTCATAGTGATGTATCTGTTATTCCCATTGTAGGCATGGGTGGGATAGGAAAGACTACTTTGGCCCAATTGGTTTACCAAGATGGCAAAGTGAAGGAGAATTTTGATTTTCGAGCTTGGATTTGTGTGTCAGAAGAGTTTGATGTTTTCAAGGTTACCAAGACTATAATCGAGGCAATAACTTCAAGTTTTTGCAACTTGACAGATTTGAATTTGCTTCAGCATGATTTAAAAGAAAAGTTGTCAAGAAAAAAATTCTTTGTTGTCTTGGACGATGTATGGAGTGAAAGTTACGAAGATTGGAATAAACTTCTAAAACCTTTTCGAAAAGGGGTTAAGGGAAGTAAAATTCTCATAACTACTAGAAGTAAAAGAGTGGCTTCTGTGGTGCAAACTGTTTCACCATATGAACTAAGCTTATTGTCTGAGGAAGATTGTTGGTTAGTGTTTTCGAAACACGCACGTCTCTCAACTGGTTCTATGGAGAATCCAACCTTGAATAAATTCGGCAAAGATCTTGTAAAGAAGTGTGATGGATTGCCCTTGGCAGCTCAAGCCCTTGGGGGCTTATTGCGTGGAAATTCTGATATCAAGTATTGGAATCATTTATTGAAGAGTGAGATCTGGGAACTCTCCGATGATAAGATAAAGGTTGTTCCCGCATTAAGAATCAGTTATTACTATCTTCCTTCGTATTTAAAGGAGTGCTTTGTTTATTGTTCTTTGTATCCCAAAGACTATGAATTTAGCAAAGATGAATTGATATTGCTATGGATGGCAGAGAATTTTTTGCAACCAGGAGGGAAAAAGACTCCAGAGGAAATTGGTGATAAATATTTTGACGAATTAGTTGCGAGATCATTTTTCCAACGTACTTTTGAAAACATATTTGTGATGCATGATCTAGTGCATGATTTGGCAATGATGTTTGCTGGAGAATTCTATTTCAGAGCTGAAGAGCTTGAGAATGCAGTTGAGGTTGATATTAAAACTCGCCGTTTGTCACATAATGGCAAAGGCAATTATCCAATCTCAAAACTTTTGGGAGTTTGTGACCGAGTAAAACACACAAGGACATTTCTTGGACTCAATTTGAGTTCAGATATTCCATTTAACATGGAAAATGCACCTTGTATCTTGTTGTCAAAGTTGAAGTACTTGAGGGCCTTGTCGTTCAAATTCTTTCCTCTCAAGTCATTGCCTGATTCAATAGGCGAGTTAATTCATTTGCGTTACTTGGATTTGTCTTACACCGACATCATGACATTGCCCGATACACTTTGTAACTTATACAATTTACAGACATTGAAGCTGTTTGGATGTTGCGCACTAGAAGCCCTTCCTGTTGGCATGAAAGATCTTACAAATTTGCGTTACCTTGATATTAGGGGGACTGGTTTGTATGAGATGCCGGAAGGCATGAGCAAATTGACAAGTTTGCAGGTTTTAAGCAGCTATGTTGTTGGGAAGCGTGAAGGGAACAAGATTAATGAATTGGGAAAACTTGCAAATCTACACCAAACAATTTCGATTGACAAATTGGAGAATGTGGTCAATAGCAGCGAAGCTTTGGAGGCAGGAATGTTTCGTAAGGATGGCATTGAATCTTTGATGTTGAAGTGGTCGCCAGCTAAATACGAGAATGTGGTTGATTCCCAAATTGAAAGAGATATACTTGAAGAGTTACGACCTCATAGTAATTTGAAACGACTACATATTTGGGGTTACAGGGGTACAGCATTTCCAGATTGGTTGGGACATTCTTCCTACCACAACATCACCCAAATAACACTGGGCGGTATTTTTTCGGGTTATTTGAAGAATTGTTGTATGCTTCCTTCACTTGGACAGTTGCCCTCTTTGAAGCACCTGGAAATTTCAATGTTTGAAAGGCTTGCTATTGTAGGGTCTGAGTTTTACCGAAATGATGAATCTTGTCTGGAGACTCCATTTCCAATGCTTGAAACTCTTAGATTTTACTCAATGCCTTGCTGGGAGGAATGGCGTTCATTGGAGTTCAATGCATTTCCTCGACTTAGGGAGCTTTCAATATGGGATTGTCCCATGTTGAGAGGAGATTTGCCCAATCAACTACCATCTTTGCGGTCACTTACTATTGAGTATTGCGAGCAGCTCAGTTGTTGTGTTCCAAGAGATCCTGCGATTACCTCTTTACGCATGGAAGGAAGCGAAGAAGTGAGAATTGGGGAGCTACCTCCTTTGCTGGATAAGCTATCAATTAATGGAAAGCAGCAAGCGGAGTCGGTGATGGAGGCCATTAAGCAAACTAAACTCAGTTGCCTCACATATTTATCCATCTCAGGTTGTTCATCCCGCGTATTGTTTCCAGTGAGTAGTATTCCCGCAGCACTACAAGATCTGACGATATTGAATTGCAAAAAATTAGAATTCGAAATGGAAGGCCAACACCACTCATTGCATCAACTAATGATAGAGAACAGCTGTGATTCGGTTACATCCTTCTCGCTGGATTCCTTTCCAAATCTCGTGCGTGTTGCAATCAGCGAGTGTGAAAAGATGGAGTCTGTCGTGGTGTCACGCTCTCTTTCATGTCTCCGTTATTTAGAGATAAAGAATTGTGGGAGTTTGAAATCCCTGCAGACGCTATGGATGGCATCACCTCAGCTAGAAGATCTCACATTACTTGGTTGCCCAGAGATTGATTTGTCTGCTACAGGAGATCCACACCGTAGCTTGAGATCTCTTACCATCCGCTACTGCGAGAAACAACTCAGCTGTGTAGCATCGCAGTTTCATGGGCTTACTCATCTTTGTATTGAAGGTGAATATGAGAGTGTGAAGTGTCTCCCAAAGGAAGGTTGGTTGCCTGCCACCCTTGAGTCTCTCAGACTGGAAAGCATTAAAAGTATGGAGATGTTGGAATGCAAGGGACTTGCCCACCTCACCTCACTCCAACAATTATCTATTGATTGTTCCAATATGGAGAACATTGATGGAGAAAAGCTGCCTGCCTCTCTGTTACGACTCATCATCAATGGAAGCCCTTTGGGTGAACGGTGTGAGATGAAGGACCCGCAGGTTTGGCCCAAAATTTGCCACATCCCCGCCATTCAAGTTGATGACAGATGGATTTGGTAA 3645 0.4118 MAAEAVLSSVLSVVFDRMSSPEVVNWIKGKKLTQNLIERLKTNLFAVQAFLIDAEQKQIKDRPVKDWLDSLKHAMYVADDLLDEVFTKAATQKDPGTFLSRFLNLQDRDVANKMEDVIDRIESLVIQKDTLGLREIPKENMSWRITTSLVETSDICGREEDKEAIVKLLLDDDTGGHSDVSVIPIVGMGGIGKTTLAQLVYQDGKVKENFDFRAWICVSEEFDVFKVTKTIIEAITSSFCNLTDLNLLQHDLKEKLSRKKFFVVLDDVWSESYEDWNKLLKPFRKGVKGSKILITTRSKRVASVVQTVSPYELSLLSEEDCWLVFSKHARLSTGSMENPTLNKFGKDLVKKCDGLPLAAQALGGLLRGNSDIKYWNHLLKSEIWELSDDKIKVVPALRISYYYLPSYLKECFVYCSLYPKDYEFSKDELILLWMAENFLQPGGKKTPEEIGDKYFDELVARSFFQRTFENIFVMHDLVHDLAMMFAGEFYFRAEELENAVEVDIKTRRLSHNGKGNYPISKLLGVCDRVKHTRTFLGLNLSSDIPFNMENAPCILLSKLKYLRALSFKFFPLKSLPDSIGELIHLRYLDLSYTDIMTLPDTLCNLYNLQTLKLFGCCALEALPVGMKDLTNLRYLDIRGTGLYEMPEGMSKLTSLQVLSSYVVGKREGNKINELGKLANLHQTISIDKLENVVNSSEALEAGMFRKDGIESLMLKWSPAKYENVVDSQIERDILEELRPHSNLKRLHIWGYRGTAFPDWLGHSSYHNITQITLGGIFSGYLKNCCMLPSLGQLPSLKHLEISMFERLAIVGSEFYRNDESCLETPFPMLETLRFYSMPCWEEWRSLEFNAFPRLRELSIWDCPMLRGDLPNQLPSLRSLTIEYCEQLSCCVPRDPAITSLRMEGSEEVRIGELPPLLDKLSINGKQQAESVMEAIKQTKLSCLTYLSISGCSSRVLFPVSSIPAALQDLTILNCKKLEFEMEGQHHSLHQLMIENSCDSVTSFSLDSFPNLVRVAISECEKMESVVVSRSLSCLRYLEIKNCGSLKSLQTLWMASPQLEDLTLLGCPEIDLSATGDPHRSLRSLTIRYCEKQLSCVASQFHGLTHLCIEGEYESVKCLPKEGWLPATLESLRLESIKSMEMLECKGLAHLTSLQQLSIDCSNMENIDGEKLPASLLRLIINGSPLGERCEMKDPQVWPKICHIPAIQVDDRWIW* 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2975 1214 PRINTS Disease resistance protein signature 352 366 - -
Ahy20g2975 1214 PRINTS Disease resistance protein signature 182 197 - -
Ahy20g2975 1214 PRINTS Disease resistance protein signature 871 887 - -
Ahy20g2975 1214 PRINTS Disease resistance protein signature 255 269 - -
Ahy20g2975 1214 Gene3D - 315 399 IPR042197 -
Ahy20g2975 1214 Gene3D - 400 484 IPR036388 -
Ahy20g2975 1214 Pfam Rx N-terminal domain 6 95 IPR041118 -
Ahy20g2975 1214 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 415 IPR027417 -
Ahy20g2975 1214 CDD RX-CC_like 37 124 IPR038005 -
Ahy20g2975 1214 Gene3D Ribonuclease Inhibitor 959 1188 IPR032675 -
Ahy20g2975 1214 SMART LRR_typ_2 1045 1066 IPR003591 -
Ahy20g2975 1214 SMART LRR_typ_2 629 652 IPR003591 -
Ahy20g2975 1214 SMART LRR_typ_2 582 605 IPR003591 -
Ahy20g2975 1214 SUPERFAMILY L domain-like 908 1200 - -
Ahy20g2975 1214 Pfam NB-ARC domain 159 381 IPR002182 GO:0043531
Ahy20g2975 1214 Gene3D Ribonuclease Inhibitor 523 936 IPR032675 -
Ahy20g2975 1214 Gene3D - 27 107 - -
Ahy20g2975 1214 PANTHER DISEASE RESISTANCE PROTEIN RP 30 870 IPR044974 GO:0006952
Ahy20g2975 1214 PANTHER OS05G0414200 PROTEIN 30 870 - -
Ahy20g2975 1214 SUPERFAMILY L domain-like 473 892 - -
Ahy20g2975 1214 Gene3D - 140 309 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2975 Ahy-Chr20 140517344 140522074 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2975 179 659 WRKY Transcription Factor Family AT5G45050 22.816 1.40e-10 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2975 - - adu:107472405 1622.06