Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2963 ATGTTCATGGTACTAGTTGTTCATCTTCAACTTTCCTGTGTACTACTCAACTTCATCCTATTACTAATATTGGTTGTCCTCTGCACTTTATCAGATTGCTACGACCCCTTGGATCCAAATGGCAACATTTCAATTACTTTTGACATTTACCAACGCACACAAGATGGATATTTGGCAAGGGTGACACTTGAGAACTACTACCAGTACCGGCATGTAGACAAACCAGGTTGGCAACTTGGATGGCAATGGGCTAATGATGAAGTTATATGGTCAATAAAGGGTGCGGTTGCAACAGATCAAGGCAACTGCTCTTCTTACACATCTCAGTTACCACATTCTTGCAAGAAAGATCCTCTCATAGTTGATCTTCCGGCCGATGTGTCGCCGGAGAGCAGGTCAGAACACTGCTGCAACGGCGGCATCCTCTCGGCTCGAGCCATCGATCCTTTCAGCTCATTGACTTTGTTTGAGCTTGAAGTACGCAACTTGGGGCAATACCCTCTTGGACAAGCACCTAATAATCTCACACTCTTAGCCCCTGGTCCTGGCTATACTTGTTCCCCTCTTCTTCAGACTGATCCCACTGTCATCTCCTCTTTTAATGGACAAAGACAAGTTCCTGCTCTCAGAACGTGGAAGTCAGCATGTACATACTCCAACTTTATGGCAAATAAGTCACCAATATGCTGTGTATCGCTCTCAACATTTTACAACCCTATGATCACACCATGCCCTGATTGCAGCTGTGGATGCAGCGAAGCAGACAAAGCTTCCAAGTCTTGCATAAGTTTGGGTAATCCCTTATCAGAGGAGAACATAATAGCATGCACTAAGCACATGTGCCCAATTCGAGTTCATTGGCATGTTAAGAACAACTATGTAACTCACTGGAGGGTGAAGCTTACCATTTCTAACTACAATTATAGGAGCAACTACTCTAACTGGAATGTGCTTCTCCAACATCCTGCCTTCTCCCAGAATGCAACTTCTTATAGTTTCAACACTGCCAAACTTCCCCTTGACTTTCAAGATGGAGTTTCTCTGTTTTGGGGGATTGATTATTACAACACCGAACTAGTGCATTCGGATAAGGATCAACAAGGTTTTGTGTCAACAGAGATACTATTAGAGAAAGATCCAAAATCTTTTACATTGAGTAATGGATGGGCTTTTCCTAGGAGGGTCTATTTCAATGGAGAGAACTGTGAAATGCCCTTACCTGACACATTTCCTATGCTTCCAAATCATACCAACACTTTGAGACCTCCCAATATTCTTTTACTCATCATCTCTTTATTCTGTTTCTGGACCCAAGCTTCCTTTCATTTTCAATAG 1335 0.4285 MFMVLVVHLQLSCVLLNFILLLILVVLCTLSDCYDPLDPNGNISITFDIYQRTQDGYLARVTLENYYQYRHVDKPGWQLGWQWANDEVIWSIKGAVATDQGNCSSYTSQLPHSCKKDPLIVDLPADVSPESRSEHCCNGGILSARAIDPFSSLTLFELEVRNLGQYPLGQAPNNLTLLAPGPGYTCSPLLQTDPTVISSFNGQRQVPALRTWKSACTYSNFMANKSPICCVSLSTFYNPMITPCPDCSCGCSEADKASKSCISLGNPLSEENIIACTKHMCPIRVHWHVKNNYVTHWRVKLTISNYNYRSNYSNWNVLLQHPAFSQNATSYSFNTAKLPLDFQDGVSLFWGIDYYNTELVHSDKDQQGFVSTEILLEKDPKSFTLSNGWAFPRRVYFNGENCEMPLPDTFPMLPNHTNTLRPPNILLLIISLFCFWTQASFHFQ* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2963 444 Pfam COBRA-like protein 57 219 IPR006918 GO:0010215|GO:0031225
Ahy20g2963 444 PIRSF COBRA 3 441 IPR006918 GO:0010215|GO:0031225
Ahy20g2963 444 PANTHER COBRA-LIKE PROTEIN 20 434 - -
Ahy20g2963 444 PANTHER PROTEIN COBRA 20 434 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2963 Ahy-Chr20 140412789 140415153 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2963 32 432 COBRA Gene Family AT3G29810 47.330 1.43e-134 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2963 - - ccaj:109801855 625.55