Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2953 ATGCTCCTCCAACTTGCTTCAATCACATATTATGTTTTCCTTCTTTCGTCTTTCTTTTTCATCTTCATCCCAACCACCCATGAGCTCCAATCAGATCAGACTCAAGCTTTGTTTCAACTCACGAAATTACTTGAATACCCTTCCTCTTTGCAAGCCTGGCAAAATTACAATGCTGACCTCTGCACCCTTTCTTCATCCCCAAATTTGACCGTTAAATGCGACCATGATTCAGTAACGGAGCTCAAAATCATGGGTGATAAATCTCTCAAGCCATCAACTTTTGATGGATATTCAATTCCCAATCATACACTAAGCCTGAATTTCTCCATTGATTCATTTTTCACCACACTAACAAGGTTAACGAGTTTAAGGGTTCTTAGCTTAGTGTCCTTAGGGTTATGGGGGCCACTACCTGAAATAATTCACCGTTTGTCTTTGCTTGAGGTTTTGGATTTGAGTTCAAATTTCTTGTTTGGTGCTTTACCACCAAAAATATCCACCATGGTAAAGCTTCACACTGTAACACTTGATGGAAATTACTTTAATGCCACTATGCCTGATTGGTTTGGCTCTTTCTCTAATCTAACAATGTTGAGTTTGAAGAGTAATCAATTCAAGGGTCAATTCCCTGTTTCACTTTGCAAAATTGAGACACTTGAAGTTATTTCCATGCCCCACAATGAGTTGTATGGTGAATTGCCTGATTTAACTGCTCTGACTGCTCTACATGTTTTGGATTTAAGGGAAAACAATTTAGATTCTCAACTACCAATCTTCCCCAAATCAGTAGTCACAGTTCTGTTGAGCAATAATTCCTTACATGGAGAGATTCCTAAGCAATTTGGTGAGTTGGTTCATCTTCAGCATTTAGATCTTTCATCAAATTACCTAAGCAGGGTGCCACCACCTTCCTTGTTCTCCTTGCCAAACATTAGTTATTTGAATTTGGCAAACAATGTGTTAAGTGGTTGCATTCTGAGGAAGCTTACTTGTGGCGGCAAGCTCGGCTTTGTGGATATTTCTGGTAACAAGTTAAATGGTGGACTACCTTCTTGCTTGGCCAATACATCTGATAGTAGAGTTGTTAGATATGGTGGAAACTGTTTGTCTATCGACAATGCTGGTTCGCACGCTCAGCGGAGAGGGTCTTATTGCGACGAATCTGGCTTGGGGTGGAAGAAAGTCAAGGCGTGGAAAGTAGCCGTGGTGGTGGCCATGGTCGTTGGACTTGTGATTGTGATTCTTGTGTCTGGAGTTTTCATGTGTAAAAGATGTCATCAGATTCAGAGGAAGATAATTAGGCATGATTTGTTGCCTAAGATTCTCCAAGGAAACTCCACCACAGGGGTTTCCTCTGAAATCCTTGCAAATGCGAGATTCATTTCTCAAACAGTGAAACTTGGATCGCAAACTACTACGACCTGTCGGCAGTTTTCAATAGAAGAGTTGAAGGAAGCTGCAAGAAACTTTGACATGTCAACTTATGTTGGTGAAGGCTCCATAGGGAAGCTGTACAAAGGTAAACTAGAGAACGGATCCCACGTGATGATAAGATCGTTGGCTCTGTCGAAAAAATGCTCAATTCAAAATCTTAAAGCCCGGTTGGATTTGCTCTCAAAGCTTCAACACCCAAATTTGGTTAGCCTTTTGGGTCATTGTATTGAATTCCAGGGACATGATGATTCTAGTTCCAACAAACTTCATCTTGTGTATGAGTATGTGCCAAATGGAAATTATCGGAGCTATTTATCAGAGTTTTCAGCAGGGAAGGCACTTAAGTGGTCTGATAGACTTGCAATTCTAATTGGAGTTGCTAAAGCTGTGCATTTCTTACATACCGGTGTCATCCCTGGTTGTTTCGAAAACCAGCTAAAGACAAAGAATGTTTTGCTTGATGAGCATCACATTCCAAAATTAAGTGACTATGGAATCGCCATCATTCGAGAAGAAATAGACAAGCATGAGGCAAAGGGAGAGAAACTAAAATCATGCCAGAGGACAAAGATGGAGAGTGATGTTTATAATTTTGGGTTCATATTGCTCGAATCACTTGTTGGACCGATAGCAAGCGACAAAGGAGAAACATTCTTTGTAAATGAAAAGGCATCCTTTGGCAGCCAAGATGGTAGAAGAAAGATTGTGGATCCCTTAGTACTGACCACTTGCTCTCAAGAGTCATTGTCAATCGCAATATCTATAACAACGAAATGCATATCGCCGGAATCTTCCTCCCGTCCCTCTTTCGAGGATGTTCTATGGAACTTGCAGTATGCTGCTCAAGTTCAAGCTACTTCAGAGGCGGATCAAAAATCAGATTCAAACATGATAGGTCCAAGTTTGTAG 2343 0.408 MLLQLASITYYVFLLSSFFFIFIPTTHELQSDQTQALFQLTKLLEYPSSLQAWQNYNADLCTLSSSPNLTVKCDHDSVTELKIMGDKSLKPSTFDGYSIPNHTLSLNFSIDSFFTTLTRLTSLRVLSLVSLGLWGPLPEIIHRLSLLEVLDLSSNFLFGALPPKISTMVKLHTVTLDGNYFNATMPDWFGSFSNLTMLSLKSNQFKGQFPVSLCKIETLEVISMPHNELYGELPDLTALTALHVLDLRENNLDSQLPIFPKSVVTVLLSNNSLHGEIPKQFGELVHLQHLDLSSNYLSRVPPPSLFSLPNISYLNLANNVLSGCILRKLTCGGKLGFVDISGNKLNGGLPSCLANTSDSRVVRYGGNCLSIDNAGSHAQRRGSYCDESGLGWKKVKAWKVAVVVAMVVGLVIVILVSGVFMCKRCHQIQRKIIRHDLLPKILQGNSTTGVSSEILANARFISQTVKLGSQTTTTCRQFSIEELKEAARNFDMSTYVGEGSIGKLYKGKLENGSHVMIRSLALSKKCSIQNLKARLDLLSKLQHPNLVSLLGHCIEFQGHDDSSSNKLHLVYEYVPNGNYRSYLSEFSAGKALKWSDRLAILIGVAKAVHFLHTGVIPGCFENQLKTKNVLLDEHHIPKLSDYGIAIIREEIDKHEAKGEKLKSCQRTKMESDVYNFGFILLESLVGPIASDKGETFFVNEKASFGSQDGRRKIVDPLVLTTCSQESLSIAISITTKCISPESSSRPSFEDVLWNLQYAAQVQATSEADQKSDSNMIGPSL* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2953 780 PANTHER INACTIVE LRR RECEPTOR-LIKE KINASE 10 772 - -
Ahy20g2953 780 Gene3D Phosphorylase Kinase; domain 1 451 573 - -
Ahy20g2953 780 SUPERFAMILY L domain-like 117 369 - -
Ahy20g2953 780 Pfam Leucine rich repeat 170 229 IPR001611 GO:0005515
Ahy20g2953 780 Pfam Leucine rich repeat 264 321 IPR001611 GO:0005515
Ahy20g2953 780 Gene3D Ribonuclease Inhibitor 30 260 IPR032675 -
Ahy20g2953 780 Pfam Protein tyrosine and serine/threonine kinase 493 752 IPR001245 GO:0004672|GO:0006468
Ahy20g2953 780 SMART LRR_typ_2 239 261 IPR003591 -
Ahy20g2953 780 SMART LRR_typ_2 144 168 IPR003591 -
Ahy20g2953 780 SMART LRR_typ_2 284 308 IPR003591 -
Ahy20g2953 780 Gene3D Ribonuclease Inhibitor 261 385 IPR032675 -
Ahy20g2953 780 Gene3D Transferase(Phosphotransferase) domain 1 574 777 - -
Ahy20g2953 780 PANTHER OS07G0166700 PROTEIN 10 772 IPR045272 GO:0004714|GO:0006468
Ahy20g2953 780 SUPERFAMILY Protein kinase-like (PK-like) 469 759 IPR011009 -
Ahy20g2953 780 ProSiteProfiles Protein kinase domain profile. 490 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2953 780 ProSiteProfiles Leucine-rich repeat profile. 286 307 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2953 Ahy-Chr20 140329542 140333489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2953 19 700 Miscellaneous Gene Families AT5G14210 55.137 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Ahy20g2953 PK_Tyr_Ser-Thr 4.60E-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2953 - - gmx:100799183 1110.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2953 20 140329542 140333489 Ahy10g2400 10 113564957 113568899 hybridization