Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2904 ATGCTCACGAAGAGCGTTATCCCGGCGGCTTGCTTCAAGGCAACTGAGGAATCGCATCCCACTTCCTCGGCAACGGCGGTTGCAGCTACAAAGGTGGGAATTTTTCCGGCCGTCCTGTCTTTTCTGTGTCCCCTTCCATCATGTGGTGTAGCTCATATTATCAAAGTCAGAAATTGGAAAGGCCAGTTGAACATTCCCTATCCAGGAAAATCACATGGAGGTGCACTGTACCAGAATGACCCAAACAAAATTCCAGCACTATCACACCACAAGAGAGGATGTAACTGTAAGAAATCATTCTGCCAAAAGAAATACTGTAAATGCTTTCAGGCTGGTGTTGGATGTTCCATAAACTGTAGATGTGACACGTGTAAGAACACGTTTGGTAGAAAGAATGGTATAAGAAGAACAACAGTGTTATCAGCAGCAAAGAGTAAAAATCCAAAGGCCACAACCCAGTCTTTCCACCTATCCCTCAACGAAAAAAAAAAAAAAGGGAAGCAAACGCGACAACAACATACTTACTGCACCTCCTTCGTCTTTATTTCTTTGCTTTCACCTCCCTCAACCCGCAAACTCTACCACCGGACTTTTGCATGTTCAAAACCTCATATCCGGCTACAAGTTACCAACCTGTCCTCATCTGCGGTGGCTCACAGTGCTTCCAGTCGGTGCGACACACCAGTGTTGCTTGGTGAATCGGCGCATAATTCATTATCTTCATGTTTTGACAGATCGAGGCACTAA 747 0.4525 MLTKSVIPAACFKATEESHPTSSATAVAATKVGIFPAVLSFLCPLPSCGVAHIIKVRNWKGQLNIPYPGKSHGGALYQNDPNKIPALSHHKRGCNCKKSFCQKKYCKCFQAGVGCSINCRCDTCKNTFGRKNGIRRTTVLSAAKSKNPKATTQSFHLSLNEKKKKGKQTRQQHTYCTSFVFISLLSPPSTRKLYHRTFACSKPHIRLQVTNLSSSAVAHSASSRCDTPVLLGESAHNSLSSCFDRSRH* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2904 248 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 80 219 - -
Ahy20g2904 248 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 91 127 IPR005172 -
Ahy20g2904 248 ProSiteProfiles CRC domain profile. 1 129 IPR005172 -
Ahy20g2904 248 SMART CXC_2 89 130 IPR033467 -
Ahy20g2904 248 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 80 219 IPR044522 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2904 Ahy-Chr20 139856011 139866116 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2904 79 133 CPP Transcription Factor Family AT4G14770 70.909 2.24e-22 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Ahy20g2904 TCR 6.10E-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2904 - - ahf:112786524 503.442