Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2900 ATGATTAGTTGTCTCTATGCCATTGAATGGAGATGCATGTGGACTCAGATTTCGTTTTCCCTCCATTTCCATCCTCAACTTGAATTCAAAAAATGTGGAAAAATACAAGCTACAGTTAAGAAACCACTCTTTAATAGGTTTAGGGATCTTATAGTTGAGGGTCAGGTTTATAGAATGGCATACTTTACTGTTGTTTCAAATCATGGTAGTTATAGAGCAACTTCTCATGAATTCAAATTGGTTTTCCTTCACCGAACCACTGTTGTAGCTGTTGATGAAGATGTTATCCCTAAGACTTGTTTCAACATGTTTCCTTTTTCTGATTTGCTGAATACGACCGAAGATTATGATTTTTTAGTTGATGTTATTGGTCTTTTAACTTCAGTGGGAGAAGAGAAAGAATATGCAAAAGAGGGCAAAATTGTGAAAATGATTGTGCTGGAATTAACTTCCAAAGATCTTACCTTGCGATGTGCATTGTTTGGGGATTATGTTAATCAAGTAAATCATTTCCTTGCGTCTGGCTATGTGGAGCAGCCTGTTGTAGTCATTCAACTTGCAAAAGTCAAGTTCTTTAGGGGTCAAGTAGGCCTTCAAAATGTGATGTATGCCACTCAAATGTTATTTAATCCTGATCTTCCTGAGGTTGTTGATTTCAGGCAGAGGATGATTGAGCAAGGGGTGAATGGTACTCAGCCACTGTTTATTGCAAATGAGGGTAAAGTTGTGTCCTTGGAAGATGATTTCATGCGTTTAACTAGAAAATGCACCATTGAAGAGCTTCAAGATAAGAATCAGGAGGGTTCTTTTTATCATTTTTGGTACAATCCAAGGTATTGTTGA 843 0.3713 MISCLYAIEWRCMWTQISFSLHFHPQLEFKKCGKIQATVKKPLFNRFRDLIVEGQVYRMAYFTVVSNHGSYRATSHEFKLVFLHRTTVVAVDEDVIPKTCFNMFPFSDLLNTTEDYDFLVDVIGLLTSVGEEKEYAKEGKIVKMIVLELTSKDLTLRCALFGDYVNQVNHFLASGYVEQPVVVIQLAKVKFFRGQVGLQNVMYATQMLFNPDLPEVVDFRQRMIEQGVNGTQPLFIANEGKVVSLEDDFMRLTRKCTIEELQDKNQEGSFYHFWYNPRYC* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2900 280 Gene3D - 19 93 IPR012340 -
Ahy20g2900 280 CDD RPA1_DBD_A_like 13 88 - -
Ahy20g2900 280 SUPERFAMILY Nucleic acid-binding proteins 33 93 IPR012340 -
Ahy20g2900 280 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 51 270 - -
Ahy20g2900 280 SUPERFAMILY Nucleic acid-binding proteins 101 223 IPR012340 -
Ahy20g2900 280 Pfam Domain of unknown function DUF223 33 115 IPR003871 -
Ahy20g2900 280 PANTHER REPLICATION FACTOR A 1, RFA1 51 270 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy20g2900 280 CDD RPA1_DBD_B_like 121 224 - -
Ahy20g2900 280 Gene3D - 95 232 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2900 Ahy-Chr20 139825033 139832062 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2900 33 220 Core DNA Replication Machinery Family AT2G06510 29.798 2.49e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2900 - - ahf:112717561 454.521