Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2881 ATGAGGATGAGTTGTAACGGATGCAGAGTGTTGAGGAAAGGGTGCAGCGAGGATTGTAGCATAAGACCGTGTTTGGAGTGGATCAAGAGCGCAGAGTCTCAAGCCAATGCTACTCTCTTCCTTGCTAAGTTCTATGGCCGCGCTGGTCTCATCAACCTCATCAACGCTGGCCCCAATCACCTTCGTCCTGCGGTTTTTCGTTCGTTATTATACGAGGCATGCGGGAGAATAGTGAACCCGATATATGGATCGGTGGGTTTGTTGTGGTCGGGGAGCTGGCAGCTCTGCCAAGCCGCCGTCGAAGCGGTTTTGAAGGGACTGCCGATCACGCCGATAAATTCGGAGCTGGCGGAGAGCGGCCGTGGTCCACCTTTCAAGGCTCATGACATACGCCACGTGTCCAAGCCTGATAACAACACCGTAACCGCCGCGTCTCACGAAACTAAGCGAGTCAAGACTCGCTCCCGAATCAAGAAGCCCAAGGTGGCCGAGGTTGCGAAGCGCGCGTCGAGTCACGAGTCATCGCTGAGCCACGAACGGGTGGAGGCGGTTGCTACGGCGGCGGAAGGAGAGAGCAAGGAGATCGAAAGTGACGTGTCGGTGGAGACGACTACGACTACGGTTCGGTTCCATGACGAACCGGATTCTGATGCAAAGGGGAGTGGTGGTTCGGCCGAAGTCTGCGGGAACGAGGTTGGGTTGGAGCTGACGCTGGGGTTTGAAACGGTGTCACGTGAGCATGACGTTGTGGTGCCAATGAAGAAGAGGAGAATTGATTTGAAGGATTTTTGTGGCGGGGTAAGTAGTGATAACGGTTCGTGCAAGATGGAGTTGGGACTTCAGTTCCAGGCTTTCAACGGTTCAGTTTTGACTTGA 876 0.5457 MRMSCNGCRVLRKGCSEDCSIRPCLEWIKSAESQANATLFLAKFYGRAGLINLINAGPNHLRPAVFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGLPITPINSELAESGRGPPFKAHDIRHVSKPDNNTVTAASHETKRVKTRSRIKKPKVAEVAKRASSHESSLSHERVEAVATAAEGESKEIESDVSVETTTTTVRFHDEPDSDAKGSGGSAEVCGNEVGLELTLGFETVSREHDVVVPMKKRRIDLKDFCGGVSSDNGSCKMELGLQFQAFNGSVLT* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2881 291 PIRSF AS2 1 160 IPR017414 -
Ahy20g2881 291 PIRSF AS2 140 278 IPR017414 -
Ahy20g2881 291 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Ahy20g2881 291 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 281 - -
Ahy20g2881 291 MobiDBLite consensus disorder prediction 118 160 - -
Ahy20g2881 291 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 281 - -
Ahy20g2881 291 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2881 Ahy-Chr20 139619876 139621206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2881 1 280 AS2 family AT3G02550 58.131 1.87e-102 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy20g2881 LOB 4.80E-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2881 - - aprc:113867933 356.681