Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2865 ATGGCGGCTCCACCGGTGGTGAGGTTCCCGATCTTCACGACTGTGAGAGCGTTTGGCGTCGCCGTCACCGTTCTTCTTCTCATTTGGACGCTTCATTTCAGAGGAGGCCTCGCTCTCATCTCTGACAACAAAGATCTCATCTTCAATGTCCATCCAGTGTTGATGGTGATTGGGCTTGTTCTGATCAATGGTGAAGGGATGCTTGCATACAAGACATTATCTGGAACAAAAAGCTTCAGAAAAACAGTGCATCTCACATTGCAGTTTCTGTCTCTAATTTTGAGTTTAATTGGTGTCTGGGCTGCTTGGAAGTTTCACATTGACAAGGGCATTGACAATTTCTACAGCCTGCATTCCTGGTTGGGCCTTGCATGCCTTTTCCTATTCTCCATCCAGTGGGCTGCCGGATTTGTGACATTTTGGTATCCGGGAGGTTCAAGGAATAGCAGAGCTGCGCTTTTGCCATGGCATGTGTTCTTTGGGATCTATATCTATGGTTTGGCTATAGCTACTGCTGCTACTGGTATTTTGGAAAAGGCGACATTCCTTCAGACGAACAATGTTATATCGCGCTATTCCAGCGAAGCCCTGCTGGTCAATACTTTAGGCATCTTGATTGTCATTTTAGGCGGCTTTGTTATTCTTGGAATCGTTGCTCCATCTGGTGGTAAATCAGAAACCACAAGAGGAAATGAATAA 699 0.4578 MAAPPVVRFPIFTTVRAFGVAVTVLLLIWTLHFRGGLALISDNKDLIFNVHPVLMVIGLVLINGEGMLAYKTLSGTKSFRKTVHLTLQFLSLILSLIGVWAAWKFHIDKGIDNFYSLHSWLGLACLFLFSIQWAAGFVTFWYPGGSRNSRAALLPWHVFFGIYIYGLAIATAATGILEKATFLQTNNVISRYSSEALLVNTLGILIVILGGFVILGIVAPSGGKSETTRGNE* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2865 232 PANTHER CYTOCHROME B561-RELATED 5 230 IPR043205 GO:0016491
Ahy20g2865 232 Pfam Eukaryotic cytochrome b561 50 182 IPR006593 -
Ahy20g2865 232 PANTHER B561, PUTATIVE-RELATED 5 230 - -
Ahy20g2865 232 CDD Cyt_b561_ACYB-1_like 41 184 - -
Ahy20g2865 232 ProSiteProfiles Cytochrome b561 domain profile. 14 218 IPR006593 -
Ahy20g2865 232 SMART 561_7 50 176 IPR006593 -
Ahy20g2865 232 Gene3D - 1 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2865 Ahy-Chr20 139383030 139385727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2865 1 226 Chloroplast and Mitochondria Gene Families AT5G38630 72.124 8.29e-122 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2865 K08360 - gmx:100787570 389.037