Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2858 ATGAGTGAAACCACAACTCCTCCTCCAACCACTAGCGACTTTGGAATTGGACAAGAACAACTGATTTCGTTATCAACAGAGCAAAGTAGTGCTGCTCTCGAGCTCTATGGAGGGGTTGTAGGGATATCGAATTTGCTGAATACCAGTTTAGAGAAGGGAATTCATGGTGATGAGGCTGATTTATTAAGACGAAGAAGGGCTTTCGGTTCTAACAATTATCCTCGAAGGAGAGGAAAAGGTTTTCTGATATTTGTATGGGAAGCTTGCAAAGATCCTACCTTGCTTATTTTACTGGTATCTGCAGCGATTTTATTGGCATTAGGGATAAAGTCTAAGGGTGTCAAGGAAGGATGGTACGATGGGGGAAGCATAGCTTTTGCTGCTTTTATTGTCATTGTAGTTACAGCCATGAGTGAATACAGGCAGTATGTTCAATTTCACGACACAAATGAAAAGAAGAGAAATATACACCTAGAGGTGATTAGAGGCGGGAGAAGGATTAAGATCTCAATTTATGATATTGTCGTTGGCGATGTTATACCCCTTAATACTGGTGACCAGGTCCCAGCTGATGGAATTCTAATCACTCCTCACCTTGCAATTGATGAATCAAGCATTCATGGGGAGAGCACAGTTGTTCATAAAAATTCTAGGGCCCCTTTCTTGATGTCTGGATGTAAAGTTGACGATGGTAGTGGCACTATGCTGGTAATAGGTGTTGGCATTAATACTGAGTGGGGTTTACAAATGGCTATTTCTTCAGATGACCCAATTGAAGAAACACCTTTGCAGGCTCGTCTAAATGGTGTAGCCACCTTGTTTGGTATTGTTGGTCTCTCTGTCACAGCCGTTATTCTGACGGTACTGCTGGCCAGATACTTCACTGGCCATACCAGAAACTTAGATGGGAATGTTCAATTTATAGCGGGCAAGACTAGAACTGTTGATGCTATACATGGAGCAGTTAGCATAGTAACAATTGCGGTCACCAGTATAGTGGTTGCAGTACCTGACAGCCTCCCATTAACAGTCAACTTCGCGTTAGCCTTCTCATTAAGGAAACTGATGGCATCTAAGATTTTGGTGAGGAAGCTTTTTGCTTGCGAGATGATGGGCTCTGCCACAGTTATTTGTAGTGACAAGAGTGGCACATTGACTATGAATCAGATGATTGTGGTTGAGGCATATGCTGGTGGTAGAAAAATTGATCCTCCTAGCAACGGGTTAAGAATCTCTCCCAAGCTCCAATCGTTGCTCATTGAAGGTGTTGCACAAAACACTAATGGCAATGTTTACTTACCTGAGGGTTGCACTGGTATTGAGATTTCTGGATCACCAACAGAAAAGGCAATTTTACATTGGGGAGTACAGATTGGGATGGATTTCGAGGCTGCCAGATCAGAGTCTTCAATTATTCACATGTTTCCTTTCAATGCAGAGAAAAAACGTGGCGGAGTTGCAATACAGAAGGCTGACCATGAAATCCACATACATTGGAAAGGTGCTGCTGAGATAATTCTTGCTCGTTGTACATGGTACTTGGATACAAATGACCATTTGATGGAGATGAATGAAGAGAAGATGGCATTTTTCAATCAAATTATTGAAGACATGGCTGCTAAAAGTCTTCGTTGTGTTGCTATTGCATATCGACCATGGAAAAAGGAGGACATTCCAGTCAATGAAGAACAATGGGCTCACTCGTCTATACTAGAAGATGATCTTATTTTGCTTGCTATTGTTGGTATAAAGGATCCTTGTCGACCTGGAATAAAAACTACAGTGCAGCTTTGCCAAAATGCTGGGGTTAAGGTGATAATGTTCACTGGTGACAACATCAATACTGCCAAAGCAATTGCTTTGGAATGTGGAATACTATCTTCCTTTGATAATGCTATAGAACCATGTGTCATTGAGGGAAGAGAATTCCGTGCCTTAACAGATGAACAAAGAGAAGAGATAGCTGAAAAAATAGTTGTTATGGGACGTTCAAGTCCTAATGACAAGTTATTACTTGTGGAAGCGCTCAGAAAGAGGGGACATATTGTTGCTGTAATTGGGGATGGAACAAATGATGCTCCGGCACTATATAAGGGCTCACAAATTGCAAAAGAAAGCTCTGATATCATACTTATGGATGACAACTTTGCTTCAATTTTGAAGGTTGTGAAATGGGGTCGATGTATATATGCTAACCTACGGAAATTTATCCAATTTAATCTTACAATAAGTGTGACAGCTCTTCTTATAAATGTTGTTACTACACTCTCTTCTGGTGATATCCCACTAAATGCTGTGCAGCTTCTGTGGGTAAATCTTATCATGGATACTCTAGGAGCACTAGCATTGGCAACTGAACAACCAACGAATCTCCTGATGAATCTACCTCCAGTAGGCCGAAGACTAAGGATTTTGGAAAATTCAAATACTTCCTTGGTATTAAGGTGGCTCAACCTAAAAAGTGGAGAACCGTTAATCTCAAATACTATGTGGAGGAACATATTGATACAGGTAGTATATCAGGTGTCTGTCTTGCTCGCTCTAAACTTTCAAGGTAGCATTCCGGGTTTCACACATGATGCAACTGATCATGGGATTAAATTGAAGAAAACATTGATCTTCGATGCATTTGTACTATGTCAGATCTTCAATGAATTTAATGCAAGGAAGCTAGATGAATTCAACATATTTAAAGGAGTCACGAGAAACTACCTCTTTATGGGAATAATAGGCTTGACAGTTGTGCTTCAGTTTATCATCGTTGAATTCCTCGGAAAATTCACTTCCACAGTCAGGCTTAATTGGAAGCAGTGGTTCATCTGTGTCATTATTGGCTTTATTAGTTGGCCTCTTGGTTGTTTTGGGAAATTGATACCAGTGCCACACACTCCCATCAATAATAAATTTAGAAGAATTCTTCATGGAAGAACTCAAATGCAAAGTGGTCAGAGTACAACAGGAGAAAGACCGTACTCAAAACTAGTTATATGTTGCTATTTGATTGTAAATTTATTTTCAAGATTTCAACGTCGAAGAACATCAACGCACCAGGTTCTATACTGTAGTGCAGTCACATGTTTTGTTTATTATCAAGATTTTCAAATCAACCGTTAA 3114 0.4014 MSETTTPPPTTSDFGIGQEQLISLSTEQSSAALELYGGVVGISNLLNTSLEKGIHGDEADLLRRRRAFGSNNYPRRRGKGFLIFVWEACKDPTLLILLVSAAILLALGIKSKGVKEGWYDGGSIAFAAFIVIVVTAMSEYRQYVQFHDTNEKKRNIHLEVIRGGRRIKISIYDIVVGDVIPLNTGDQVPADGILITPHLAIDESSIHGESTVVHKNSRAPFLMSGCKVDDGSGTMLVIGVGINTEWGLQMAISSDDPIEETPLQARLNGVATLFGIVGLSVTAVILTVLLARYFTGHTRNLDGNVQFIAGKTRTVDAIHGAVSIVTIAVTSIVVAVPDSLPLTVNFALAFSLRKLMASKILVRKLFACEMMGSATVICSDKSGTLTMNQMIVVEAYAGGRKIDPPSNGLRISPKLQSLLIEGVAQNTNGNVYLPEGCTGIEISGSPTEKAILHWGVQIGMDFEAARSESSIIHMFPFNAEKKRGGVAIQKADHEIHIHWKGAAEIILARCTWYLDTNDHLMEMNEEKMAFFNQIIEDMAAKSLRCVAIAYRPWKKEDIPVNEEQWAHSSILEDDLILLAIVGIKDPCRPGIKTTVQLCQNAGVKVIMFTGDNINTAKAIALECGILSSFDNAIEPCVIEGREFRALTDEQREEIAEKIVVMGRSSPNDKLLLVEALRKRGHIVAVIGDGTNDAPALYKGSQIAKESSDIILMDDNFASILKVVKWGRCIYANLRKFIQFNLTISVTALLINVVTTLSSGDIPLNAVQLLWVNLIMDTLGALALATEQPTNLLMNLPPVGRRLRILENSNTSLVLRWLNLKSGEPLISNTMWRNILIQVVYQVSVLLALNFQGSIPGFTHDATDHGIKLKKTLIFDAFVLCQIFNEFNARKLDEFNIFKGVTRNYLFMGIIGLTVVLQFIIVEFLGKFTSTVRLNWKQWFICVIIGFISWPLGCFGKLIPVPHTPINNKFRRILHGRTQMQSGQSTTGERPYSKLVICCYLIVNLFSRFQRRRTSTHQVLYCSAVTCFVYYQDFQINR* 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2858 1037 Gene3D - 388 586 IPR023299 GO:0000166
Ahy20g2858 1037 Gene3D - 87 947 - -
Ahy20g2858 1037 Gene3D - 375 721 IPR023214 -
Ahy20g2858 1037 PRINTS Sodium/potassium-transporting ATPase signature 371 392 - -
Ahy20g2858 1037 PRINTS Sodium/potassium-transporting ATPase signature 497 515 - -
Ahy20g2858 1037 PRINTS Sodium/potassium-transporting ATPase signature 122 142 - -
Ahy20g2858 1037 SUPERFAMILY HAD-like 376 781 IPR036412 -
Ahy20g2858 1037 Pfam Cation transporting ATPase, C-terminus 820 957 IPR006068 -
Ahy20g2858 1037 Pfam Cation transporting ATPase, C-terminus 761 808 IPR006068 -
Ahy20g2858 1037 Gene3D - 60 254 - -
Ahy20g2858 1037 SUPERFAMILY Calcium ATPase, transmembrane domain M 38 960 IPR023298 -
Ahy20g2858 1037 Pfam E1-E2 ATPase 157 356 - -
Ahy20g2858 1037 Pfam Cation transporter/ATPase, N-terminus 38 103 IPR004014 -
Ahy20g2858 1037 SUPERFAMILY Calcium ATPase, transduction domain A 157 247 IPR008250 -
Ahy20g2858 1037 SMART Cation_ATPase_N_a_2 38 109 IPR004014 -
Ahy20g2858 1037 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 25 960 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Ahy20g2858 1037 PRINTS P-type cation-transporting ATPase superfamily signature 579 590 - -
Ahy20g2858 1037 PRINTS P-type cation-transporting ATPase superfamily signature 601 611 - -
Ahy20g2858 1037 PRINTS P-type cation-transporting ATPase superfamily signature 686 705 - -
Ahy20g2858 1037 PRINTS P-type cation-transporting ATPase superfamily signature 378 392 - -
Ahy20g2858 1037 PRINTS P-type cation-transporting ATPase superfamily signature 202 216 - -
Ahy20g2858 1037 PANTHER CALCIUM-TRANSPORTING ATPASE 7 977 - -
Ahy20g2858 1037 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 652 755 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy20g2858 1037 Pfam haloacid dehalogenase-like hydrolase 376 696 - -
Ahy20g2858 1037 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 385 583 IPR023299 GO:0000166
Ahy20g2858 1037 PANTHER CATION TRANSPORTING ATPASE 7 977 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2858 Ahy-Chr20 139273391 139307496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2858 1 985 Primary Pumps ATPases AT5G57110 60.939 0.0 1246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2858 K01537 - gmx:100792945 1347.03