Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2838 ATGGAATTTCTTGTGGCATTAGCAACTGGAGTTGTGACAAAACTTGGGGAGTCATTAGTAGCACCAATCACAAACCAATTTGCATACATAATCCGCTACAAAAGAAATGTGAAGAATTTGGAGAGCCAGATGAAGGAATTGGAAGGCAAGAAACTTGGAGTGCAAGCAACTGTGGATGCAGATAAAAGGAATTCACATCAAATTGCATCTAATGTTGAAGATTGGCTTTGCAAGATAGACACAATTGAGAATGAATTACAAGGATTCTATGAAGATGATGAACAAGTGAAAAACAAGTATCTGAATTTGGTGTCATGTTATTCATTGAGCAAGAGAGCCAAAAAATTAACCAATGATATTATGAGGCTCAAGGAAGAGAAATTTGAAATCATATCTTACCCTAAACCCCCACCAAGACTTGGATCAAGATTCTTGAATGGTACTACTATTAAGAGCTTCCAAACAAGAGAATCAATCATGTGTGAGGTCATAGATAAATTGAAAGCTGAAGATGTGAATAGAATTAGCATATGTGGAATGGGTGGTGTTGGAAAAACCACCTTTGTGAAAGAAGTGATCAAGATTTTAGAGGCAGATAAGTCTTTTGATGAGGTTGTCATGGCAGTGGTGTCTCAAACTCCAGATTGCAGGAAGATCCAAGGTCAGATTGCTGATGCCATTGGATTGAAGCTTGACAAGGAAACTGATCAAGGAAGAGCTCTTCAACTGCATGATCGATTGAAGAATATAGATAGTGTTCTGATAGTGCTAGATGATGTTTGGACAGACCTTGATTTTGAATCCATTGGCATTCCTTCCACAAGTTGCAAGATCTTATTCACTTCAAGAATCCAAGATGTGTGCATCAAGATGAAGAGTCAAAGGAATTTCACAGTTTCTGTCTTGTCCCGAGACGAAAGCTGGGATCTTTTCAATGAGACTATTGGAGCTAATCTTGCAGAGAAACCTGACATCCATGACATAGCAAAAGAAATTGCAAACCAATGCAGGGGATTGCCTATCGCGATTGTAACAATAGCGAAAGCATTGGCGAATAAAGAGAAGCATGCTTGGGAGGATGCATTGGAGCAACTGAGGAATTCATCAGTAGAATCTTTTCCTGAAATGCAGACTAGTGTCTTTTCTTGCATTGAGCTAAGTTACAACTTTCTTGGTGGTGAAGAAAAGTTCTTCCTTTTCCTCTGTTCCTTATTACCAGAAGACTTTGACATTCCCATTGAAGTCCTATTCAGACATGGTGTGGGATTAGGAATGTTCAAAGGCATTGATGCTTTGTGGAAAGTTAGAAACCGGGTGCACACAATCGTCGATAGACTGAAAGAATGCTTCATGCTGTTGGATAGCAATGTGGAAGAGTGTGTTAAAATGCATGATGTTGTTCGCGATACTATCGCCTCTGTAGCAGGAAAATATCATCATCATTTGGAGTGTTATAGCAGTGCAATCTCACTAATCTTTGAGAAGAAAACAGAACTTCCTCATGTTTCAAATTGTCAAAAGCTGAAGCTTTTACAAGTATCATCAAAGGGAAAGGAATCTGTTCCAGAAAATTTCTTCCAAGGCATGAACAAACTCATGGTACTAAGTCTGCAAAATGTGTTGATTCAATCTATGCCTTCTACACTTTCAGCTTTGGACAACATCCACACTCTAAGATTAGAAGCTTGCAATGTTGGAGACATATCCATAATTGGCCAGAAACTCATGAAATTGGAGATTCTAAGCTTTGCTAAATCAAGTATCAAGGTATTGCCATTAGAAATTGGGCAACTAACTTTGCTAAGATTGTTGGATTTAACTGAATGCAATCATCTTATTCAAATTTCTGCTACTGTTTTGGCAAGCTTATCTAGGCTAGAGGAACTCTATCTTAGAGTAAGAAATTTTCCTTCAAAGGAATCTAATCATATCCTCTTTGAGTTGCAATGCTTATCTCATCAGCTAAAAGTTCTTGAGTTTGCATTTATTATGGTAGATGAATTTCTTCCCAAAGACTTAATCTTCAAAAACATTGTAAGGTTTTGGGTCTATGTGGGAGATTCATCTACCATTTCCCATGGTCTTGTTCCTAGGGGATACCTACACCCAAATGTGCTGACATTAAATAACACATATTACAGTTACATCAAGAAGAGTGTGATCATTCAACATTTTCTTCAAAGAGTTGAAATTCTCAGCTTAGATGATATCAAGAACTTAAAATGTGTCATATCAGATTTAGATGAAGAGGGATTTCCACTTCTGAAAAATCTGATCATTGAGTCCTGCAACAATTTAGAGTATGCTGCAGATTCATGTGATGATCATTGTGTTTTTCCACAAGTTCAATCAATTTCTTTGAGGAATTTGGAGAATTTAAAAGCAATAATATGTCATGTGGCCCATCATTTGAGTCAAAAGGTTGACTTTAGTGCATGCCAATGCTTTGGAAGCCTACAAGTTCTTAAAATAGAATATTGTAAAAGTTTGAAGACCATCTTCACATTATTGTTTCCAAGGAGAACTACTAGTTTGGCCAAACTTCAATGCTTGCATGTGGTTGAAAGCCATGGAATAGAATGCATTGTTTCAATCAATACAATCAAGGTTGATGACTCAATTATTGTGTTTACTAATTTGGTGGAATTGAAGCTGCAAGAACTTCCAAATTTGACTGCATTCATCAAAACTAGTATTATGCATGAGCACCATTCACCTTATAAGGTTCAAGAATCCAATACATTACTTGAAAACTTTATTGAACATGATCAAGAGTTTTCCGGGTCAGCTTCGGAATCAGATTCGAGTGAACATATGAACATTGGTTGTGCACTTTTTGAATCTAATTCATTGCAATTGTTTCCAAAGTTAGAGAAAATTTTGCTACGGGCATGTTCATCATTAAACATAGTTTTTGATATGAAACCATCACAATCAGAAGATCAACATGTGGATAATGCTGCATTTTTTGCTCAACTAAAAGAGCTAGAGTTATCATGGCTTAATAATCTAAACCACATTTGGGGTTCTGTTCCAAGAAACATTCAAGGCTTTCATAAACTGAAATCAATCAAAGTTGCAAACTGTGATTCTTTGAAATATATATTTACTCCAAGCATTGTAAGAGCTCTTACTCAACTTGAGAAATTGGTGATACAAAGTTGCATGTCCCTAGAGAAATTTGTTGGGAATGAACAAGGCCAAAATGTGGAAACCCTTGTGTTTGTTCAATTGGAATCTTTAACACTTAAGGATCTTCCACAGCTTGTGAATTTTGGTCCAAATTCTTACATGATATTGTGGCCAGCTATGAAGTCTTTATGCATTGATGGTTGCCCCCTGCTCAAGGCATCTAATGTATGTGTACAAGAGAATTTCAATGTCATGTCCAATTCAACAACAACCCATGATGTTGGAACTACTACTTCTATGGAAGATTCTCCTAGTCTGAGGTTTCTTCAATGTTGTTTTGGAGGCACAAAGGAATTGTTAGTTTCCAATTCAAAGGCAAAGGTACTATAA 3522 0.368 MEFLVALATGVVTKLGESLVAPITNQFAYIIRYKRNVKNLESQMKELEGKKLGVQATVDADKRNSHQIASNVEDWLCKIDTIENELQGFYEDDEQVKNKYLNLVSCYSLSKRAKKLTNDIMRLKEEKFEIISYPKPPPRLGSRFLNGTTIKSFQTRESIMCEVIDKLKAEDVNRISICGMGGVGKTTFVKEVIKILEADKSFDEVVMAVVSQTPDCRKIQGQIADAIGLKLDKETDQGRALQLHDRLKNIDSVLIVLDDVWTDLDFESIGIPSTSCKILFTSRIQDVCIKMKSQRNFTVSVLSRDESWDLFNETIGANLAEKPDIHDIAKEIANQCRGLPIAIVTIAKALANKEKHAWEDALEQLRNSSVESFPEMQTSVFSCIELSYNFLGGEEKFFLFLCSLLPEDFDIPIEVLFRHGVGLGMFKGIDALWKVRNRVHTIVDRLKECFMLLDSNVEECVKMHDVVRDTIASVAGKYHHHLECYSSAISLIFEKKTELPHVSNCQKLKLLQVSSKGKESVPENFFQGMNKLMVLSLQNVLIQSMPSTLSALDNIHTLRLEACNVGDISIIGQKLMKLEILSFAKSSIKVLPLEIGQLTLLRLLDLTECNHLIQISATVLASLSRLEELYLRVRNFPSKESNHILFELQCLSHQLKVLEFAFIMVDEFLPKDLIFKNIVRFWVYVGDSSTISHGLVPRGYLHPNVLTLNNTYYSYIKKSVIIQHFLQRVEILSLDDIKNLKCVISDLDEEGFPLLKNLIIESCNNLEYAADSCDDHCVFPQVQSISLRNLENLKAIICHVAHHLSQKVDFSACQCFGSLQVLKIEYCKSLKTIFTLLFPRRTTSLAKLQCLHVVESHGIECIVSINTIKVDDSIIVFTNLVELKLQELPNLTAFIKTSIMHEHHSPYKVQESNTLLENFIEHDQEFSGSASESDSSEHMNIGCALFESNSLQLFPKLEKILLRACSSLNIVFDMKPSQSEDQHVDNAAFFAQLKELELSWLNNLNHIWGSVPRNIQGFHKLKSIKVANCDSLKYIFTPSIVRALTQLEKLVIQSCMSLEKFVGNEQGQNVETLVFVQLESLTLKDLPQLVNFGPNSYMILWPAMKSLCIDGCPLLKASNVCVQENFNVMSNSTTTHDVGTTTSMEDSPSLRFLQCCFGGTKELLVSNSKAKVL* 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2838 1173 Gene3D - 147 300 IPR027417 -
Ahy20g2838 1173 Gene3D Ribonuclease Inhibitor 934 1136 IPR032675 -
Ahy20g2838 1173 Coils Coil 106 126 - -
Ahy20g2838 1173 Gene3D - 301 389 IPR042197 -
Ahy20g2838 1173 SUPERFAMILY L domain-like 462 1118 - -
Ahy20g2838 1173 PRINTS Disease resistance protein signature 596 612 - -
Ahy20g2838 1173 PRINTS Disease resistance protein signature 247 261 - -
Ahy20g2838 1173 PRINTS Disease resistance protein signature 174 189 - -
Ahy20g2838 1173 PRINTS Disease resistance protein signature 336 350 - -
Ahy20g2838 1173 PANTHER PHOSPHATASE, PUTATIVE-RELATED 8 1052 - -
Ahy20g2838 1173 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 402 IPR027417 -
Ahy20g2838 1173 PANTHER - 8 1052 - -
Ahy20g2838 1173 Coils Coil 30 57 - -
Ahy20g2838 1173 Coils Coil 348 368 - -
Ahy20g2838 1173 Pfam NB-ARC domain 157 389 IPR002182 GO:0043531
Ahy20g2838 1173 Gene3D Ribonuclease Inhibitor 481 899 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2838 Ahy-Chr20 139024037 139027633 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2838 171 469 WRKY Transcription Factor Family AT5G45050 24.528 8.31e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2838 - - ahf:112786511 2291.92