Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2831 ATGAGAATAATAAACAAAGAATCTCCAACAATGGCGGTTGGTGTCGTGAAGTGTAATTACATCAGAAAACGCAAAAGAGCATCATTGAAGCAAAAACTTCTTCTTAATGAGAGAGTTGAGGTAAGGAGTGTGGAAGATGGGTTTATGGGGTCATGGCACCCAGGTACAGTTATACATTGTGGCAAACAAAAGCGTCATGTGAGGTATGACAATGTATTGGAAGATGATGGATCAAGCCATGTTGTTGATGTGGTTGCTGTTTCACCTGTTGTGGATGGTGTTAGTGTTTCAGATTCTAATGTTGAGCGTGGCTACATTAGGCCAATGCCTCCGATGTTTGAATTTGGTGGATGGGACCTCCCATTTGGACTTTGTGTCGACGTAAGTTACCAAGAAGCATGGTGGGAAGGTGTTATTTTTGATCACTGCAATGGAATGGATGAGAGGAGGGTGTTCTTCCCTGATTTGGGTGATGAGATGAAAATTGGGATCCATCATTTGAGGATGACTCATGATTGGGATGAATTTGCCGACGATTGGAAGCCAAGGGGGAACTGGGTTTTTCTTGAATTGGTAGAGGAGTGTGAGAGGTTGTCCTATGTTGCTGTCTCAGTGAAGCAGATTTGGTATGATGTGAGGGTTAGGAAGGAGTTTGAGAGCCTTATTAGGGATTGGACTTGTGATGAGAAGGAATTGTGGAGAGATCTTGTTATGGAGGTAGCTGGTGACTACTATGCTCTCACATTGCAAGACATTTTGCCAGCATTAAAAATTGATTTCTTGGAAGAAACTCCAAGAACCGAGTTAGTTGAGCCTACTGCTATTGCTGATAGTGATGATGTTCCCACTAATGCATTTGGTTCTTGCACAGGAATAACTGATGTCTCTGAGGAGAAAGGTGACTCCGCGAATCTAATGGATTGTGATCAAAACTCTGGTAGCATCGATCATATTCAAGAGGAAAACAATATAGATACTTTGATTGCTGGGGCCTTTGACGAGCAAAATATGTCAGAGTTAAATGTGAATGTACCTGAGGAGGAAGATGTGAGGTCAAGAGAACCGATATCTCCAATTCAGCAAATATTTCCTGAAGATCAAAAGGAAACTTCCAGCCATAGACATGTTCGTTCACCTGTGCTTTGGAAACCTTTGGTGTTGTCAGAAGTTGAATTCTGTCCTGAGGTTATTAAGCAATACACACTTGGATGTGAGAGCAAGAGGGTTAGGGAACTCTTGAAGACAAAAGTGAGAAAACATCTTGCTTATATTGGATGGACAATTGAGGTGACTGAAGACAGGTATTTTGCTGGGCGATACAGATACAGATACAAGCCACCTGGTGAACAAGGCACAAAATTTTACACTTCAATTGCCAAAGCTTGTAGATATATTAAGCAAAATGAACCTCTGGTGTCCCAAAATGACCCGGGTAGGATGCATGATATGGTCGATAGTAGCATTCTACATCTTCTTTCTGATCAATCGCGTAGCAATCGGGTTGATGATGCTTATAATTCTACGGTGGCGTCTTCCTCTTCTGCGAAAGTTGTAGTTGAACCTGAATTTTGTCCGGAAGCTGTTGTGAAATATTACTTGCATGCATTAGAGAATCGCCATGCTGATAAAAGGAAATGGAACTTGAAAGCAAAACAACATCTGTTAGCAGAAGGATGGGTTTTTGACTATCCAACTGAGAAACGGAGGAGAACATTGTACAAGTCTCCGAAAAATCAGACTTTGGGAACACTTCAAGGTGCTTGTAGGCTATACATTAAAGAAAGTATTCCCAAATGGACAATTTCCAGCATGAGACCTATGCATCTCTCTGTTGGTAACGAAGAAAGTGTTCATAGTGATGATCTATTACGTTGTGTCTCACAATTGGTTCAAAGGGAACCTGAATTACACAATGGTTTGCCAGTGAGTACTTCAAAAGGGAATGGGAATGAAAACAATCCTCGCTCGAAGAATTCAAAGAATAGCTCCCGAAAGCGCCATAGGAATGGAGTACCTACACGGGTGCTAAGATCAAGCAAAAGGGTGCAGAAAGTGCTTGCCCCTGGATTCTTACACCAAAAACCTCAAAATATTTTGTCTTGGTTAATAGATAACAACATCTTTTCGGCAAAGTGTAAGGTCTATTTCAGGGAAAAACGTGGCAAGAATTCAATCAAGGCTGAGGGGCGCATAGGTCGTGATGGAATCAAGTGTTGCTGTTGTCAAGAGATATACAGTCTTTGTGGCTTTGCTAATCATGCTGGTTCCAATAGTAACCACAGACCTTCTGCTAGTATCTTCTTGAAAGACGGTCGCTCGCTACTGGATTGCCAGATTCAAGTAATGCATGAAAAAACGAAGGAGGAGAAAACGGAGAAACAATCAAATGATCTTTGTCGAGGGGAAAACGACAACATTTGTTCTGTGTGTCAATATGGGGGTGAACTTATCTTGTGTGATCAATGTCCTTCTGCATTTCATATGAGTTGTCTAGGTTTGAAGGTAATTCCTGGTGGTGACTGGTTTTGTCCATCATGTCGATGTGGAATTTGCAGCGAAATCAAGGGGGATAAGGGCAAACAATTTCTTAATTGCATTCAATGTGAACGTAAATATCATCTTGAGTGCTTGAGAAATGGAACAGTAGATAAATTAAGACGTATGGCAAAATGGTTCTGTGGAAACAAATGTGAACAGATATACACCAGCCTGCATAAACAATTAGGAAAACCAATTGCAGTGGATGCAGACAATCTAACTTGGACATTGATCAAGTCTGTTGACTCTGAGAATTGTGATGTTGGTTCTGCTAAAGACAAATACTTGGCAGAGAATTACAGCAAACTCAATATTGCACTTTCTGTGATGCATGAATGCTTTGAGCCCCTACAGAACCCTTCCTCTAGCAGAGATCTCATGGAAGATGTCATATTCAGCAGATGGTCTGAGCTTAATAGAACGAATTTCCAGGGTTTCTACACTGTACTTCTTGAAAGAAATGAAGAACTGATAAGCGTGGCAACTTTTAGGGTGTATGGAGAGAAGGTCGCAGAAGTACCACTTGTAGGTACGAGATTTCAGTACCGTCGACTTGGAATGTGTCGCATTTTAATGAATGAACTTGAAAAGATGCTCACACAGCTAGGGGTGGAGAGGCTAGTTTTGCCTGCTGTTCCTGGTGTGCTCGAGACATGGACGAAATCTTTTGGCTTTGACCAGATGACAGAATTCCAAAGATCAGAGTTTCTGGACTACACTTTCCTAGATTTTCAAGGAGCCATCATGTGCCAAAAGCTATTGGGAAAGGAGAGTCAATCTCCGGATTCAGTTATAACAAGAGAGATCCTGCCAGCATCAGGCTCTGTTAAATGTAAAATTGATTTTGAAAAGTTCAGTTCTGGATCTGATGAAGTATACCAAGGAGAGGAAACTGATGAAAGTAGAATGACAGATGTACAAATGGTGGAGTACGTCTCGCTGTTGTCGACGATTAAACAAGAAAACAAATCTTAA 3513 0.413 MRIINKESPTMAVGVVKCNYIRKRKRASLKQKLLLNERVEVRSVEDGFMGSWHPGTVIHCGKQKRHVRYDNVLEDDGSSHVVDVVAVSPVVDGVSVSDSNVERGYIRPMPPMFEFGGWDLPFGLCVDVSYQEAWWEGVIFDHCNGMDERRVFFPDLGDEMKIGIHHLRMTHDWDEFADDWKPRGNWVFLELVEECERLSYVAVSVKQIWYDVRVRKEFESLIRDWTCDEKELWRDLVMEVAGDYYALTLQDILPALKIDFLEETPRTELVEPTAIADSDDVPTNAFGSCTGITDVSEEKGDSANLMDCDQNSGSIDHIQEENNIDTLIAGAFDEQNMSELNVNVPEEEDVRSREPISPIQQIFPEDQKETSSHRHVRSPVLWKPLVLSEVEFCPEVIKQYTLGCESKRVRELLKTKVRKHLAYIGWTIEVTEDRYFAGRYRYRYKPPGEQGTKFYTSIAKACRYIKQNEPLVSQNDPGRMHDMVDSSILHLLSDQSRSNRVDDAYNSTVASSSSAKVVVEPEFCPEAVVKYYLHALENRHADKRKWNLKAKQHLLAEGWVFDYPTEKRRRTLYKSPKNQTLGTLQGACRLYIKESIPKWTISSMRPMHLSVGNEESVHSDDLLRCVSQLVQREPELHNGLPVSTSKGNGNENNPRSKNSKNSSRKRHRNGVPTRVLRSSKRVQKVLAPGFLHQKPQNILSWLIDNNIFSAKCKVYFREKRGKNSIKAEGRIGRDGIKCCCCQEIYSLCGFANHAGSNSNHRPSASIFLKDGRSLLDCQIQVMHEKTKEEKTEKQSNDLCRGENDNICSVCQYGGELILCDQCPSAFHMSCLGLKVIPGGDWFCPSCRCGICSEIKGDKGKQFLNCIQCERKYHLECLRNGTVDKLRRMAKWFCGNKCEQIYTSLHKQLGKPIAVDADNLTWTLIKSVDSENCDVGSAKDKYLAENYSKLNIALSVMHECFEPLQNPSSSRDLMEDVIFSRWSELNRTNFQGFYTVLLERNEELISVATFRVYGEKVAEVPLVGTRFQYRRLGMCRILMNELEKMLTQLGVERLVLPAVPGVLETWTKSFGFDQMTEFQRSEFLDYTFLDFQGAIMCQKLLGKESQSPDSVITREILPASGSVKCKIDFEKFSSGSDEVYQGEETDESRMTDVQMVEYVSLLSTIKQENKS* 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2831 1170 PANTHER PHD ZINC FINGER PROTEIN 20 1156 - -
Ahy20g2831 1170 CDD NAT_SF 995 1055 - -
Ahy20g2831 1170 MobiDBLite consensus disorder prediction 636 675 - -
Ahy20g2831 1170 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 954 1081 IPR016181 -
Ahy20g2831 1170 Pfam Agenet domain 37 111 IPR008395 -
Ahy20g2831 1170 SUPERFAMILY FYVE/PHD zinc finger 791 847 IPR011011 -
Ahy20g2831 1170 Gene3D - 938 1103 - -
Ahy20g2831 1170 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 939 1089 IPR000182 GO:0016407
Ahy20g2831 1170 Pfam Acetyltransferase (GNAT) family 973 1071 IPR000182 GO:0016407
Ahy20g2831 1170 CDD PHD1_AIRE 807 846 - -
Ahy20g2831 1170 Pfam Tify domain binding domain 729 780 IPR032308 -
Ahy20g2831 1170 MobiDBLite consensus disorder prediction 659 674 - -
Ahy20g2831 1170 Pfam PHD-finger 806 848 IPR019787 -
Ahy20g2831 1170 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 849 900 IPR013083 -
Ahy20g2831 1170 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 798 848 IPR013083 -
Ahy20g2831 1170 MobiDBLite consensus disorder prediction 641 657 - -
Ahy20g2831 1170 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 20 1156 - -
Ahy20g2831 1170 SMART PHD_3 848 898 IPR001965 -
Ahy20g2831 1170 SMART PHD_3 806 847 IPR001965 -
Ahy20g2831 1170 ProSiteProfiles Zinc finger PHD-type profile. 804 849 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2831 Ahy-Chr20 138961708 138970273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2831 33 1048 PHD Transcription Factor Family AT5G58610 36.355 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Ahy20g2831 Acetyltransf_1 0.00032 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2831 - - adu:107471457 2251.48