Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2814 ATGGCATCAATGTCGGCCTCAGGTTCATGGAGTGCCAAGGACAACAAGGCCTTTGAGAGGGCACTGGCTGTCTATGACAAGGACACTCCTGACCGTTGGAATAACGTCGCCAACGCTGTTGGCGGCGGCAAGACCCCCGACGACGTCAAGACCCACTATGAGCTTCTTCTTCGAGATATTAAGTTCATTGAATCTGGCCAAGTTCCATTTCCATACCACAAAAATCTTAATCCAACCTCTCAACAAGAAGATGACAACAATAGGCTTAAGAATCTAAAGCTAAATTAA 288 0.4653 MASMSASGSWSAKDNKAFERALAVYDKDTPDRWNNVANAVGGGKTPDDVKTHYELLLRDIKFIESGQVPFPYHKNLNPTSQQEDDNNRLKNLKLN* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2814 95 Pfam Myb-like DNA-binding domain 8 54 IPR001005 -
Ahy20g2814 95 ProSiteProfiles SANT domain profile. 5 61 IPR017884 -
Ahy20g2814 95 ProSiteProfiles Myb-like domain profile. 8 57 IPR001005 -
Ahy20g2814 95 SUPERFAMILY Homeodomain-like 8 65 IPR009057 -
Ahy20g2814 95 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 2 94 - -
Ahy20g2814 95 CDD SANT 9 57 IPR001005 -
Ahy20g2814 95 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 94 IPR044636 GO:0003700
Ahy20g2814 95 Gene3D - 2 70 - -
Ahy20g2814 95 MobiDBLite consensus disorder prediction 72 95 - -
Ahy20g2814 95 SMART sant 6 59 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2814 Ahy-Chr20 138691265 138692654 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy20g2814 Myb_DNA-binding 1.50E-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2814 - - gmx:100804396 132.109