Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2812 ATGATACTAATTCATAAGTCACACACTATGATTGCATCATTTGTTTCAACACTACTACTACTTATTGTGGGAGTAGTGAATTCATATCCGGAAGGCGATAAGATAAGCAGTTTGCCAGGCCAGCCACGTGTCACATTTCAGCAATATGCTGGCTACATTACTGTCGATGATAACCATGATAGAGCTTTGTTTTATTATTTTGTTGAAGCTGAATCAAACCCTGCTTCCAAGCCACTAGTTCTTTGGTTGAATGGAGGGCCTGGTTGTTCTTCGGTTGGAGTTGGAGCTTTTGTTGAGAATGGTCCTTTCAGACCCGGTGACAACAATATTCTTCTAAAAAATGATTATAGTTGGAATAAAGAGGCAAACATGCTATATTTGGAATCACCAGCTGGAGTTGGTTTCTCATACTCTAGCAATAAATCTTTCTATGACTTGGTTACAGATGAGATAACAGCAAGGGATAATCTTATATTCTTAGAGCGCTGGTTTGCTAAATTTCCTGAGTATGCAAAAAACGAGTTCTTCATTACTGGGGAGAGCTATGCAGGTCACTATGTTCCACAACTTGCATTTCTTCTTATTCAATCCAACACCACCTTCAATGTTAATCTTAAGGGAATAGCGTTAGGGAATCCTCTGCTGGATTTTAATGTTGACCTGAATTCGGAAGCGGATTATTTATGGTCTCATGGGCTAATATCTGATTCGACATACGAACTATACAATACAATATGCAACTCTTCTCAATATATGAGAGAATCTATAGATAGAAAGATTAGTGCTGATTGTGCAAGAGTAAATAATGTATCGTCCACCGAGATATCCGATTATGTTGATCAATATGATGTCACTCTTGATGTTTGTTTGTCACCAGCCAAACAACAAGTTTATATGCTCACAAATCAAATGCATGCTACACAAAATATAGATGTTTGTGTGGGAGATAAATTAGTGGTATACTTAAATAGGAAAGATGTGCAACAAGCACTCCATGCTAAACTTGTTGGAGTTACCAAATGGTCAACTTGCAGCACGGTTCTGAATTATGACTATCATAATCTAGAAATACCAACACTTCCTCTTCTAGGTACATTCGTTGAGTTGGGTATTCGGGTTCTCGTATACAGTGGAGACCAAGATTCAGTGATCCCATTAATTGGGTCAAGATTTCTGGTGAATGCATTAGCCAAAGAAATTGGACTCAATACAACAGTGCCCTATGGAGTCTGGTTTGAGGGAAAACAGGTAGCGGGATGGACACAAGAATATGGCAAGATATTATCATATGCGACGATTAGAGGAGCATCTCATGAAGCTCCATTCTCTCAACCAGCCAGATCTTTAGTGCTACTTCAAGCATTTCTTCAAGGAAAACCACTTTCCAATAATATATGA 1398 0.3848 MILIHKSHTMIASFVSTLLLLIVGVVNSYPEGDKISSLPGQPRVTFQQYAGYITVDDNHDRALFYYFVEAESNPASKPLVLWLNGGPGCSSVGVGAFVENGPFRPGDNNILLKNDYSWNKEANMLYLESPAGVGFSYSSNKSFYDLVTDEITARDNLIFLERWFAKFPEYAKNEFFITGESYAGHYVPQLAFLLIQSNTTFNVNLKGIALGNPLLDFNVDLNSEADYLWSHGLISDSTYELYNTICNSSQYMRESIDRKISADCARVNNVSSTEISDYVDQYDVTLDVCLSPAKQQVYMLTNQMHATQNIDVCVGDKLVVYLNRKDVQQALHAKLVGVTKWSTCSTVLNYDYHNLEIPTLPLLGTFVELGIRVLVYSGDQDSVIPLIGSRFLVNALAKEIGLNTTVPYGVWFEGKQVAGWTQEYGKILSYATIRGASHEAPFSQPARSLVLLQAFLQGKPLSNNI* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2812 465 ProSitePatterns Serine carboxypeptidases, histidine active site. 428 445 IPR033124 GO:0004185
Ahy20g2812 465 Gene3D alpha/beta hydrolase 31 464 IPR029058 -
Ahy20g2812 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
Ahy20g2812 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Ahy20g2812 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Ahy20g2812 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Ahy20g2812 465 ProSitePatterns Serine carboxypeptidases, serine active site. 177 184 IPR018202 GO:0004185
Ahy20g2812 465 PANTHER CARBOXYPEPTIDASE 9 461 - -
Ahy20g2812 465 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 461 IPR001563 GO:0004185|GO:0006508
Ahy20g2812 465 SUPERFAMILY alpha/beta-Hydrolases 36 461 IPR029058 -
Ahy20g2812 465 Pfam Serine carboxypeptidase 40 458 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2812 Ahy-Chr20 138660756 138665435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2812 321 461 Calmodulin-binding Proteins AT2G22960 30.496 7.94e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2812 K16297 - gmx:100799900 680.633