Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2793 ATGGCTTCAAGACCCATCGTTCCTCAACAAGCAAGAGGTGATGCAATCGTAAGAGGAGGGAAGCAGCAACAGGAGCAGAAGAAGAATGGTGCCGGAAACCGTAAAGCCCTCGGAGAGATCGGAAATTTGGTCACTGTTAAAGGTGTAGAGGTCAAGCCCAATCGCCCCATTACAAGGAGTTTCTGTGCACAACTTCTTGCCAATGCGCAAAAAGAAGCAGCTGCTGAAAACAACAAGAAACAGGTATGTGCTAATGTGGGTGGACCTGCTCCTCACGGAGTTGCAGTTGCTACAAAGAGGGGTGCACCAAAGCCTGCTGCTACCAAGAATGTGACTATAAAACCAAAGCCTGCAGTGGTGGAAGTCATTGATATAAGCTCTGAAAAGGAGACACCAAAGGACAAGCCTGTGAACAAGAATAAAAAGGAAGCAGATGTCAACTCCAAGAAGAAACCACACACTCTCACTTCAGTCCTCACAGCCAGAAGCAAGGCAGCATGTGATCTTACTAAGAAACCAAAGGAGCAGATTGTTGACATTGATGCAGCTGATGTTAATGATGAGCTTGCTGCTGTTGAATACATTGAAGACATCTACAAGTTCTATAAGCTAGTTGAGAATGAGAGCCGTCCACATGATTACATGGACTCACAGCCAGAGATCAATGAAAAGATGAGAGCCATATTGGTTGATTGGCTCACAGATGTGCACACCAAGTTTGACCTCTCTCCTGAGACACTTTATCTGACCATCAACATCATTGATAGATTCTTAGCAGTGAAGACTGTGCCAAGAACGGAACTCCAATTGGTTGGGATCAGTGCCATGCTCATGGCATCCAAGTATGAAGAAATCTGGCCCCCGGAGGTGAATGACTTTGTGTGCCTCTCAGATAGAGCTTACACAAATGAACAGATTCTTGTCATGGAGAAAGTCATATTGGACAAGCTGGAATGGACTTTGACTGTGCCTACTCCATTTGTTTTCCTTGTTCGTTTCATCAAGGCTTCAGTTCCAGATGAACAGCTAGAGAACATGTCACACTTTCTATCTGAGTTGGGAATGATGCATTATGCAACCTTAATGTACTGTCCATCAATGGTTGCAGCCTCAGCAGTTTTTGCAGCTAGATGCACACTTAACAAGACACCTCTTTGGAGTGACACACTTAAGCTACACACCGGTTACACACAAGAACAACTTATGGATTGTGCTAAGCTACTAGTGAGTTTTCACTCGAATGTTGGGAATGGGAAGTTGAAGGTTTTGTACAGAAAATACTCAGATCCACAGAAAGGTGCTGTAGCTGTGCTTTCACCAGCTAAATATCTTCTCCCGGAAGCTTCTTCTGTCTCTTCTGGCTCTACACATTGA 1374 0.4454 MASRPIVPQQARGDAIVRGGKQQQEQKKNGAGNRKALGEIGNLVTVKGVEVKPNRPITRSFCAQLLANAQKEAAAENNKKQVCANVGGPAPHGVAVATKRGAPKPAATKNVTIKPKPAVVEVIDISSEKETPKDKPVNKNKKEADVNSKKKPHTLTSVLTARSKAACDLTKKPKEQIVDIDAADVNDELAAVEYIEDIYKFYKLVENESRPHDYMDSQPEINEKMRAILVDWLTDVHTKFDLSPETLYLTINIIDRFLAVKTVPRTELQLVGISAMLMASKYEEIWPPEVNDFVCLSDRAYTNEQILVMEKVILDKLEWTLTVPTPFVFLVRFIKASVPDEQLENMSHFLSELGMMHYATLMYCPSMVAASAVFAARCTLNKTPLWSDTLKLHTGYTQEQLMDCAKLLVSFHSNVGNGKLKVLYRKYSDPQKGAVAVLSPAKYLLPEASSVSSGSTH* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2793 457 ProSitePatterns Cyclins signature. 226 257 IPR006671 -
Ahy20g2793 457 SUPERFAMILY Cyclin-like 186 321 IPR036915 -
Ahy20g2793 457 Pfam Cyclin, C-terminal domain 324 440 IPR004367 -
Ahy20g2793 457 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 21 448 - -
Ahy20g2793 457 SMART Cyclin_C_2 324 441 IPR004367 -
Ahy20g2793 457 Pfam Cyclin, N-terminal domain 197 321 IPR006671 -
Ahy20g2793 457 MobiDBLite consensus disorder prediction 1 33 - -
Ahy20g2793 457 PANTHER CYCLINS 21 448 IPR039361 -
Ahy20g2793 457 Gene3D - 197 436 - -
Ahy20g2793 457 PIRSF Cyclin_A_B_D_E 1 453 IPR039361 -
Ahy20g2793 457 CDD CYCLIN 225 314 IPR013763 -
Ahy20g2793 457 SMART cyclin_7 328 410 IPR013763 -
Ahy20g2793 457 SMART cyclin_7 231 315 IPR013763 -
Ahy20g2793 457 SUPERFAMILY Cyclin-like 323 442 IPR036915 -
Ahy20g2793 457 MobiDBLite consensus disorder prediction 125 153 - -
Ahy20g2793 457 Gene3D - 211 322 - -
Ahy20g2793 457 MobiDBLite consensus disorder prediction 126 150 - -
Ahy20g2793 457 CDD CYCLIN 322 409 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2793 Ahy-Chr20 138347965 138350755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2793 1 445 Core Cell Cycle Gene Families AT4G37490 52.620 1.05e-147 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2793 K21777 - gmx:547919 650.588