Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2765 ATGGCGAAGCAAAGTGTTTATCCTAATAAGGAACATGAAGGGATTGTACACAATTCTTCAGGGCCCTGGTGGAGTCTCTTTGGATCTCAATATGGGGAATCTTGTGGCCAAATGAAACCCTTTTCACTGGAGATTCCCAACTATGTTGATCAAATTGCCACCGGCAAGCAATCGGTGAGAGGAGCTGAAAACATATCTGGGAAAGGACATACAACTCAGTTTACCATCTTTCCAGATGATTGTAAAATGCCATGTGGTGCACAAAAGCCTCAAGCAGCCCTATCTCTGCAGTCACCACTTGCTGATACCAACACTAGATTCGAGCTAGGATTCAACCAGCCAATGATCTGTGCAAAATATCCATATATGGATCAAATTTATGGGCTCTTCTCACCTTATGGACCTCAAATTTCGGGACGGATAATGCTGCCACTTAGTATGACATCCGATGATGGACCAATTTATGTGAATGCTAAGCAGTACCATGGAATCATCAGACGCCGGCAGTCCCGTGCCAAAGCTGTACTTGATAACAAATTGACAAAACGTCGCAAGCCATATATGCATGAATCACGTCATCTCCATGCAATGCGGCGACCAAGAGGATGTGGCGGTCGCTTCTTGAACACGAAGAATTCCGATGATCAAAATGATAAAAGTGGAAACAAAGTGATCAAAGCTCTTGGCGAACAGTTGCAATCTTGTGGCTCTCAGAGTTCTGAAGTGCTGCAATCTGAGGTTGGAACTCTGAATTCTTCAAAAGAGACTAATGGAAGCAGTCCGAATATTTCCGGGTCAGAGGTGACTAGCATGTATTCACGCGGAGGTCTCGATAGTTTTGCTATCAGTCATCTTGGTTCTGCCGTCACTGTCCACTCTCTAGCGGACATGATAGACGGCGGGCGGGGCATGAATATGATCATGCCCCCCAAATGGGTTGCAGCAGTTGGTGGCAATTGCTGCAACCTTAATGCTTGA 978 0.455 MAKQSVYPNKEHEGIVHNSSGPWWSLFGSQYGESCGQMKPFSLEIPNYVDQIATGKQSVRGAENISGKGHTTQFTIFPDDCKMPCGAQKPQAALSLQSPLADTNTRFELGFNQPMICAKYPYMDQIYGLFSPYGPQISGRIMLPLSMTSDDGPIYVNAKQYHGIIRRRQSRAKAVLDNKLTKRRKPYMHESRHLHAMRRPRGCGGRFLNTKNSDDQNDKSGNKVIKALGEQLQSCGSQSSEVLQSEVGTLNSSKETNGSSPNISGSEVTSMYSRGGLDSFAISHLGSAVTVHSLADMIDGGRGMNMIMPPKWVAAVGGNCCNLNA* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2765 325 MobiDBLite consensus disorder prediction 198 221 - -
Ahy20g2765 325 ProSiteProfiles NF-YA/HAP2 family profile. 150 210 IPR001289 GO:0003700|GO:0006355
Ahy20g2765 325 SMART cbf3 149 210 IPR001289 GO:0003700|GO:0006355
Ahy20g2765 325 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 153 207 IPR001289 GO:0003700|GO:0006355
Ahy20g2765 325 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 5 324 IPR001289 GO:0003700|GO:0006355
Ahy20g2765 325 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR 5 324 - -
Ahy20g2765 325 Gene3D - 150 212 - -
Ahy20g2765 325 PRINTS CCAAT-binding transcription factor subunit B signature 153 175 IPR001289 GO:0003700|GO:0006355
Ahy20g2765 325 PRINTS CCAAT-binding transcription factor subunit B signature 184 207 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2765 Ahy-Chr20 137968905 137972982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2765 1 323 CCAAT-HAP2 Transcription Factor Family AT3G05690 44.412 4.29e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Ahy20g2765 CBFB_NFYA 7.80E-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2765 K08064 - gmx:100527677 484.952