Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2742 ATGGTCTCTACCGTTGCATTAATAGGCAGTGATCAGCCACTTGCCATGACCCTTCAAACAAAATTAGGATTTGCGTTTTCATCAGTCATAATAGCCATTTCATCTGCCTCAACTTTCACAATAGGTTCATCTGCCTCAGCTTTGACAATCGGTTCATCACCATCGGGGTTGCCAGGGATGAAAATACCACTAGGGGCGTGCGCGTCGTCAGATGGGGATGTGGTTGAATTGGAAGAAAGTTTGGACGGCGCCGGAGGAATGTCTGACAATTATGCGGACGATGAGTTTTACGCTGTTGATTCCGGCGAGTCGCTAGCAATATGCAAAGCACCATGGCTTCGGCGCGAGACGTTCCAGAAGGAAAAACGCGGCGAAGTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGGGTACCGATCCCCGAAGTTCTCCTTGATGCCTAACCGGAAAAAGAGGCCGAGGGCCGAGACACGGTGTGGATGCCCTGCAAGGATGCTACTCCGCATGGACAATGAATCAGGACGTTGGCACGTTGCGTACTTTTCAGACGCGCATAACCACAACGTTCTTGAGTTGCGATTTTCTTCCATGCTCCCAGGCCATCGGAGGATGAGCGAAGCGGACATCGAGCAGATGAACGACATGCGCAAAGGGGGCATTGGCGTCTCCCAAATTCACCGATTTATGGCGAGCCTAGCCGGCGGGTATCATAATGTCCTGTACACAACAAGGGACATGCACAATGTAAATGCGAAGCAACGAAGGAAGGGTGGCCTAGATGTGGAATCGTGCTTAAGGTATCTCCGAGAGTGCAAGGCAAATGATCCAGCACTGTACTACAAGGAAATTGTTGACGGTGAGGGCGTGTTGCAACATTTTTTTTGGTGTGACGGCACCAGCCAAATTGATTACCAGGTGTTTGGAGACGTGGTTGCATTTGATGCAACGTACAAGAAAAACTTTTACCTTTCACCTCTTGTAGTATTCTCCGGTGTGAATCACCATAACCAAATGGCTGTCTTTGCCGCTGCACTAGTGGCAGACGAGAAAGAAGAGACCTATGTCTGGCTGCTTCAACAGTTGAAAACTTCAATGAAAGGGAAGGCTCCCGTGTCCATAATAACCGACGGTGACAGGCAAATGAAGTCTGCGATCGAGCAAGTTTTTCCAGAGGCTCACCATCGACTCTGTGCTTGGCATCTACTCCGAAACGCCACGAGCAACATCGGAAAGCCTAAATTCACCAGGATGTTTAGGGATTGCATGCTTGGCGACTACGAGGTCCGAACATTCCAGAGAAAGTGGTTTGAGATGGTTGAGAAATTTGGCGTTGCCGATAAAAGATGGATATAG 1356 0.4941 MVSTVALIGSDQPLAMTLQTKLGFAFSSVIIAISSASTFTIGSSASALTIGSSPSGLPGMKIPLGACASSDGDVVELEESLDGAGGMSDNYADDEFYAVDSGESLAICKAPWLRRETFQKEKRGEVRIRQEFVCHRQGYRSPKFSLMPNRKKRPRAETRCGCPARMLLRMDNESGRWHVAYFSDAHNHNVLELRFSSMLPGHRRMSEADIEQMNDMRKGGIGVSQIHRFMASLAGGYHNVLYTTRDMHNVNAKQRRKGGLDVESCLRYLRECKANDPALYYKEIVDGEGVLQHFFWCDGTSQIDYQVFGDVVAFDATYKKNFYLSPLVVFSGVNHHNQMAVFAAALVADEKEETYVWLLQQLKTSMKGKAPVSIITDGDRQMKSAIEQVFPEAHHRLCAWHLLRNATSNIGKPKFTRMFRDCMLGDYEVRTFQRKWFEMVEKFGVADKRWI* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2742 451 PANTHER OS02G0262500 PROTEIN 134 450 - -
Ahy20g2742 451 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 134 450 IPR031052 GO:0006355
Ahy20g2742 451 ProSiteProfiles WRKY domain profile. 103 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy20g2742 451 Pfam MULE transposase domain 311 405 IPR018289 -
Ahy20g2742 451 Pfam FAR1 DNA-binding domain 114 191 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2742 Ahy-Chr20 137589823 137593784 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g2742 MULE 2.30E-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2742 - - ahf:112779874 689.878