Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2722 ATGGAAGATCAGTTTTTCTCTGAGGGAGAGGGAATTGGGTATTGGACACCTCCTGGCGCTCAATTCGATGGACCAAGCATGATAGACAACGGAATAAAAAATCTTGTATCAGAGGAGAAGCTTGACAACCTCCCTGATCTCATGAACTTCGATAACCTTGCTGGTTGGGTGGAACAGGCCAATGATCCATACTTTATGACAAAAGATTGTGGAAATTATAATGCTATTGAAACCTCCTTGGGTTTCGATGACAAGGTTGTGTTACAGCAATTGGAGACCCAACTTGGGTTGTCAGAAGATGCAAATGATATGAATAACATAAATGGATCACTTCAAGAATTGAGTGCTGCTGACATGGGAAATTGCTTGGTGCCTAGACCATTTGCTTGGTCGCTTGATGAGAAAATGCTGAGGGCTATGAACTTGTTTAAGGAATCAGTTGGTGATGGAATATTGACACAAGTTTGGGCACCAATGAAGCATGGTAATGACTTCATCTTAAGCACAAGTGAGCAACCCTATTTGCTAGATCACATGCTAGCTGGATATCGAGACGTGTCGAGGGAATTTACCTTTTCTGCTGAAGACAAACCAGGGTCTTTTCCAGGGCTTCCCGGACGTGTGTTTATGTCCCAAATTCCTGAATGGACCTCCAATGTTGGGTACTACAATAAAAGTGAGTACATGAGGGTGGAGCATGCAATTAATCACGAGGTTCGTGGATCAATTGCGGTTCCCATAATTGATACGCTCGCTGAACCACCTTGTTGTGCTGTACTAGAACTTGTCACTACAAAGGAAAAGCCTGATTTTGACAAAGAACTAAAAATTGTTAGCAGTGCACTCCAGCTTGTTAATTTAAGGACTACTACGTCTCCACGACTTATGTCCCAGTGTCTATCAAATAACAAAAGAGCAGCTTTAACAGAGATAATTGATGTGTTACGAGCTGTGTGTCATGCGCATAGTTTGCCACTGGCATTGACATGGATCCCCTGTTATTATAGTGAGGGGATAGGAGATGAAGCTTCAAGAATACGGATTAAAGATGGGGGTAAAATTCCTGGTGAAAAAACTGTACTATGCATTGAAGAATCAGCTTGCTATATAAATGATATTGTGGTAGGAGGATTTGTTCATGCATGTGTTGAACATTATCTCGAGGAAGGGCAAGGTGTAGCTGGGAAAGCGCTTCAATTAAATCGTCCATTCTTCTATTCCGATGTGAAGGCCTATAATATTAGTGAATATCCCCTTGTTCACCATGCGCGAAAATATAAGTTGAATGCTGCCGTTGCAGTCAGGCTAAGGAGTATTCATACCAATGATGATGATTACATGATAGAATTCTTTCTACCTGTCAATATGAATGGAAGTCAAGAACAGCAACTTTTATTAGACAATCTATCAGGTACTATGCAGAGAATGTGTCAGAGTTTGAGGACAGTATCGGATGCTAAATTATACGGGATAGAAGGTTCGCAAGTGCAGTTTTCAAAGGAAGAAGGCTCGAGTTTTTGCTCTATGTCTAGGGGAAACTCTCATATGGCGCCGGATGGTGACCATGATTCGGTCCAGCCTATGTCCGTGACAAACAATGAAACTGAAGCTGCTCATAACCAGGCAATGGATGGATCAAGAAAGCAGATTGAGAAAAAGAAAAGTCCAGTGGAGAAGAATGTTAGCTTGAGTGTTCTCCAGCAATACTTCTCCGGTAGTCTTAAAGATGCGGCTAAAAGCCTTGGTGTTTGCCCAACAACCCTGAAAAGGATATGCAGGCAACACGGAATTGCAAGATGGCCATCGCGCAAGATCAATAAAGTTAATCATTCGTTAAAAAAAATACAAACCGTGCTTGACTCAGTCCAGGGTGTGGAAGGAGGACTGAAGTTTGATCCTTACAAAGGGGGATTTATGCCAGGAGGATCAAGCAACCAAGAAATTAATGCACATAAAAGTTCTCTCTTCTGGAAGAAATGTTCTGGAAAATTTCCTGATCCTGCATCAAAAGATGCAGTCACCGTATCTCCGGCATCTGGTAGCAAAGATTCAAAACCAATAGCCATGGATGATGGTGGATTACGGCAGGAACCCTTTCGGGTTTCTATTTTGGAAAGTTCTAGGTGTGATATAGCCTATCACAGTCCAAACACCCTCGGCGAGCATCACAATCCCACTACTTCAAGCATGTCAGACTCGTCGAATGGCTCTGGCTCTCGGAAATTTGAGAATCGGAAACATTTGAAAGCCAAATCACCTTGTCTTGATAAGGGATCAAAAATTAGTGTCAAAGCTGCCTACAAAGAAGATATGATCCGTTTCAAGTTTGATCCTGCAGCTGGTTGTCTCCAGCTCTATGAAGAAGTTGCAACAAGATTCAAATTACAAATCGGATCATTCCTGCTGAAGTATCTCGACGATGAAGAGAAATGGGTGATGATGGTAAATGACTCAGATTTGGAAGAATTCATAGAAATATCGGATGATCTTCGCACCCGTGCTGTGAAATTTCTTGTTAGCGACCTAGTGGTTTGA 2535 0.4209 MEDQFFSEGEGIGYWTPPGAQFDGPSMIDNGIKNLVSEEKLDNLPDLMNFDNLAGWVEQANDPYFMTKDCGNYNAIETSLGFDDKVVLQQLETQLGLSEDANDMNNINGSLQELSAADMGNCLVPRPFAWSLDEKMLRAMNLFKESVGDGILTQVWAPMKHGNDFILSTSEQPYLLDHMLAGYRDVSREFTFSAEDKPGSFPGLPGRVFMSQIPEWTSNVGYYNKSEYMRVEHAINHEVRGSIAVPIIDTLAEPPCCAVLELVTTKEKPDFDKELKIVSSALQLVNLRTTTSPRLMSQCLSNNKRAALTEIIDVLRAVCHAHSLPLALTWIPCYYSEGIGDEASRIRIKDGGKIPGEKTVLCIEESACYINDIVVGGFVHACVEHYLEEGQGVAGKALQLNRPFFYSDVKAYNISEYPLVHHARKYKLNAAVAVRLRSIHTNDDDYMIEFFLPVNMNGSQEQQLLLDNLSGTMQRMCQSLRTVSDAKLYGIEGSQVQFSKEEGSSFCSMSRGNSHMAPDGDHDSVQPMSVTNNETEAAHNQAMDGSRKQIEKKKSPVEKNVSLSVLQQYFSGSLKDAAKSLGVCPTTLKRICRQHGIARWPSRKINKVNHSLKKIQTVLDSVQGVEGGLKFDPYKGGFMPGGSSNQEINAHKSSLFWKKCSGKFPDPASKDAVTVSPASGSKDSKPIAMDDGGLRQEPFRVSILESSRCDIAYHSPNTLGEHHNPTTSSMSDSSNGSGSRKFENRKHLKAKSPCLDKGSKISVKAAYKEDMIRFKFDPAAGCLQLYEEVATRFKLQIGSFLLKYLDDEEKWVMMVNDSDLEEFIEISDDLRTRAVKFLVSDLVV* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2722 844 PANTHER PROTEIN NLP8 714 842 IPR045012 GO:0003700
Ahy20g2722 844 PANTHER PROTEIN NLP8 5 56 IPR045012 GO:0003700
Ahy20g2722 844 SUPERFAMILY CAD & PB1 domains 757 841 - -
Ahy20g2722 844 MobiDBLite consensus disorder prediction 715 746 - -
Ahy20g2722 844 MobiDBLite consensus disorder prediction 671 692 - -
Ahy20g2722 844 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 714 842 - -
Ahy20g2722 844 ProSiteProfiles RWP-RK domain profile. 540 628 IPR003035 -
Ahy20g2722 844 PANTHER PROTEIN NLP8 57 683 IPR045012 GO:0003700
Ahy20g2722 844 SMART PB1_new 760 842 IPR000270 GO:0005515
Ahy20g2722 844 Gene3D - 757 840 - -
Ahy20g2722 844 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 57 683 - -
Ahy20g2722 844 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 5 56 - -
Ahy20g2722 844 MobiDBLite consensus disorder prediction 719 738 - -
Ahy20g2722 844 Pfam PB1 domain 761 840 IPR000270 GO:0005515
Ahy20g2722 844 ProSiteProfiles PB1 domain profile. 760 842 IPR000270 GO:0005515
Ahy20g2722 844 Pfam RWP-RK domain 560 608 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2722 Ahy-Chr20 137239556 137243539 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2722 1 842 NLP Transcription Factor Family AT2G43500 46.228 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Ahy20g2722 PB1 2.40E-13 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2722 - - ahf:112736799 1583.16