Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2682 ATGAAAGAGATAGATTCATCATCATCAGATCTTGCAGCTGGCCTGGTTTCAAGAACAACAAGAAGTGATGAAAAAGCAATTAGTAAGGGCCCATCATCATCATCATCATCATCACATCAATGGCTAAGATTGAAGGATCCGCGGATCGTACGGGTATCAAGAGCGTTGGGAGGAAAAGACAGACACAGCAAGGTTTGCACAATAAGAGGGCTAAGAGACAGAAGGGTAAGGCTTTCAGTTCCCACAGCAATTAACCTCTATGATCTTCAAGACAGGTTAGGGCTCAATCAACCAAGCAAGGTTGTTGATTGGTTACTCAATGCTGCTAAGCATGAAATTGATGACCTTCCCCCTCTTCCCATTCCTCCTTCCAATTTTACCCTTGCTTGTTATCCCTCTCTTCCTACTAATAAATCTAATCATAATAAAGAGCAGGATAGTAGTAATAATACTAGTGCACATGTTTTGCCTAATAGTTTCTTATTACCAACAACAATAAACCATAATCATCATCCTCCTTCATTCTTGGGATTATTGAACACTATGCCATCATCAATTGGTAATCATTTTTACCAATCAGCTTCTCATGATGATGTTGCTAATCAATTATTGGGGAATAATAATAATAATAATAATAATCTTGGATTTGTGAATCATCATCATGATGGGGTTAATGTTGTAAATTTACCCTTTCAAAACATAGGAGCTTCTCAAATATTGTGTTGTTCTCCTTCTCCTCTTCCACGTGCGGCGGCCGCGGCGACCACCGCGACAACACAGTCATATTTTTCTCCTTCTTCTTTTTCGCATTATAATAATAATAATGTTGCTGCAGCAATGGAAATAATGGATCCAAGGCAAATCAACCACCATCATCATGGTGATGAGTCATCATCAGAATCTTGCAAAATCACCTAA 918 0.3878 MKEIDSSSSDLAAGLVSRTTRSDEKAISKGPSSSSSSSHQWLRLKDPRIVRVSRALGGKDRHSKVCTIRGLRDRRVRLSVPTAINLYDLQDRLGLNQPSKVVDWLLNAAKHEIDDLPPLPIPPSNFTLACYPSLPTNKSNHNKEQDSSNNTSAHVLPNSFLLPTTINHNHHPPSFLGLLNTMPSSIGNHFYQSASHDDVANQLLGNNNNNNNNLGFVNHHHDGVNVVNLPFQNIGASQILCCSPSPLPRAAAAATTATTQSYFSPSSFSHYNNNNVAAAMEIMDPRQINHHHHGDESSSESCKIT* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2682 305 MobiDBLite consensus disorder prediction 26 42 - -
Ahy20g2682 305 ProSiteProfiles TCP domain profile. 58 116 IPR017887 -
Ahy20g2682 305 Pfam TCP family transcription factor 58 169 IPR017887 -
Ahy20g2682 305 MobiDBLite consensus disorder prediction 1 42 - -
Ahy20g2682 305 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 22 299 - -
Ahy20g2682 305 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 22 299 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2682 Ahy-Chr20 136592246 136593753 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2682 22 291 TCP Transcription Factor Family AT3G02150 38.667 5.49e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy20g2682 TCP 5.70E-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2682 - - adu:107471262 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2682 20 136592246 136593753 Ahy10g2172 10 110274482 110276362 hybridization