Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2680 ATGATGGCGCAAACACCACCACCGATCAAAGTCCATAAAGTTTACAAGGTATCGCCGTCACAAACCACCACCACAACAACCACCCTACCCCTCACCTTCTTCGACATAAGATGGCTAAGGCTTCCACCAGTTGAGCGTCTCTTCTTCTACGCATTCCCAAACCCAACCATCTCTTTCTTTGACTCTCTTCTTCCCAATCTCAAACGCTCCCTTGAACTCACTCTCCAACACTTCTTCCCCCTCGCCGGTAACATCACTTGGCCACAACATTCTCCCATTCCTACCATCACCTACTTCCCCGGACATGACTCCGTTTCTCTCACTGTTTCCGAGTCAAACGATGACTTTGACCACGTTTCCTCTGACTTCTGTGAGGTTTCCAAACGACGCCGTTTGGTACCTGGCTTGAGCGTTTCCGATGACAAAACCTCTTTGCTCGCATTACAGGTTACTCTCTTTCCAAACTCCGGCTTCGTCATCGGAATAACAACTCACCACGCAGGTGTCGATGGAAACTGTTCAACGGTTTTTGTAAAAGCGTGGGCGTACGCGTGCTCCAAGATCATGAAACATCCATCTCTCTCAACTTTGCCAACGATATCGTTACCTGAAAATCTAACACCGTTTCTTGATAGATCCGTTATAAAGGACGCGAAAGGACTCGCCCAATCGTTTTCTGACGCGTGGATGAACTTCTCTGGACCAAACAATAGGAGCGTCATGCTCTGGAAAAACAAAAACAACCGTGAAGAAGTCCAGCTCGATAATAATGAGTCGGTTAAAGGCGTGTTTGAATTGAAGCCCTCGCATATTCAGAAGCTCAAGAATTATGTGAAATCCAAAACCGGCATCACTAAGGTTTCAACTTTTTCTGTTACAGTTGCTTATTCATTATCATGCTTAGTGAAAGCAGAACAACCAGAGCAGGAGCAAGTTGCTCTTGTGTTCCCTGTGGATTGTAGATCAAGATTGGAACCAGTGGTTTCTCCAACTTATTTTGGTAACTGCCTCATGGGGCGTTTGGTTTTGGAAGAGACAGAGAAGGTGATGGCAAGCGAGGGGTTCGTTACCGTGCTGAAAGGGATAAGCGAGGTTTTGAATGGATTGGAGAGTGGGGTTTTGAATGACGTAGAGAAATGGCAGAAGAAGATTGAATCTGTTTTTTTGGAAGGAAAGAAGAGAGCGTACTCTATTGCTGGTTCAACCCGGTTCGGGGTTTATGGGGTTGATTTTGGATATGGAAGGCCTAAGAAAGTTGATGTTGCTTCGGTGGATAAAACCGGAGCTTTTGCACTTTCTGAGAGTAGAGATGGTGATGGTGGTGTTGAGATTGCTTTGGCTTTGAAGAAGGAACAAATGGAGGTTTTTTCATCTCTGTTTTATGGTCAATTTGAATCTTTTTGA 1404 0.453 MMAQTPPPIKVHKVYKVSPSQTTTTTTTLPLTFFDIRWLRLPPVERLFFYAFPNPTISFFDSLLPNLKRSLELTLQHFFPLAGNITWPQHSPIPTITYFPGHDSVSLTVSESNDDFDHVSSDFCEVSKRRRLVPGLSVSDDKTSLLALQVTLFPNSGFVIGITTHHAGVDGNCSTVFVKAWAYACSKIMKHPSLSTLPTISLPENLTPFLDRSVIKDAKGLAQSFSDAWMNFSGPNNRSVMLWKNKNNREEVQLDNNESVKGVFELKPSHIQKLKNYVKSKTGITKVSTFSVTVAYSLSCLVKAEQPEQEQVALVFPVDCRSRLEPVVSPTYFGNCLMGRLVLEETEKVMASEGFVTVLKGISEVLNGLESGVLNDVEKWQKKIESVFLEGKKRAYSIAGSTRFGVYGVDFGYGRPKKVDVASVDKTGAFALSESRDGDGGVEIALALKKEQMEVFSSLFYGQFESF* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2680 467 Pfam Transferase family 10 459 - -
Ahy20g2680 467 Gene3D - 9 241 IPR023213 -
Ahy20g2680 467 PANTHER - 6 466 - -
Ahy20g2680 467 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 6 466 - -
Ahy20g2680 467 SUPERFAMILY CoA-dependent acyltransferases 285 424 - -
Ahy20g2680 467 Gene3D - 255 467 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2680 Ahy-Chr20 136534733 136536403 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2680 47 461 Monolignol Biosynthesis Gene Families AT5G48930 23.529 1.72e-20 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2680 - - gmx:100800849 484.567