Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2679 ATGATGGCGCAAACACCACCACCGATCAAAGTCCATGAAGTTTACAAGGTATCGCCGTCACAAACCACCACCACCACCACAACCACCACCCTACCCCTCACCTTCTTCGACATAAGATGGCTAAGGCTTCCACCAGTTGAGCGTCTCTTCTTCTACGCATTCCCAAACCCAACCATTTCTTTCTTTGACTTTCTTCTTCCCAATCTCAAACGCTCCCTTGAACTCACTCTCCAACACTTCTTCCCCCTCGCCGGTAACATCACTTGGCCACAACATTCTCCCATTCCTACCATCACCTACGTCCCCGGACATGACTCCGTTTCTCTCGCTTTTTCCGAGTCAAACGATGACTTTGACCACATTTCCTCTGACTTCTGTGAGGTTTCCAAACGACGCCGTTTGGTACCTAGCTTGAGCGTTTCCGATGACAAAACCTCTTTGCTCGCATTACAAGTTACTCTCTTTCCAAACTCCGGCTTCGTCATCGGAATAACAACTCACCACGCAGGTGTCGATGGAAACTGTTCAACGGTTTTTGTAAAAGCGTGGGCGTACGCGTGCTCCAAGATCATGGAACATCCATCTCTCTCAACTTTGCCAACGATATCGTTACCTGAAAATCTAACACCGTTTCTTCATAGATCCGTTATAAAGGACGCGAAAGGACTCGCCCAATCGTTTTCTGACGCGTGGATGAACTTCTCTGGACCAAACAATAGGAGCGTCATGCTCTGGGGAAACAAAAACAACCGTGAAGAAGTCCAGCTCGATAATAATGAGCCGGTTAAAGGCATCTTTGAATTGAAGCCCTCGCATATTCAGAAGCTCAAGAATTATGTGAAATCCAAAACCGGCATCGTTAAGGTTTCAACTTTTTCTGTTACAGTTGCTTATTCATTATCATGCTTAGTGAAAGCAGAACAACCAGAGCAGGAGCAAGTTGCTCTTGTGTTCCCTGTGGATTGTAGATCAAGATTGGAACCAGTGGTTTCTCCAACTTATTTTGGTAACTGCCTCATGGGGCGTTTGGTTTTGGAAGAGACAGAGAAGGTGATGGCAAGCGAGGGGTTCGTTACCGTGCTGAAAGGGATAAGCGAGGTTTTGAATGGATTGGAGAGTGGGGTTTTGAATGACGTAGAGAAATGGCAGAGGAAGATTGAATCTGTTTTTTTGGAAGGAAAGAGAGCGTACTCCATTGCTGGTTCAACCCGGTTCGGGGTTTATGGGGTTGATTTTGGATATGGAAGGCCTAAGAAAGTTGATGTTGCTTCGGTGGATAAAACCGGAGCTTTTGCACTTTCTGAGAGTAGAGATGGTGATGGTGGTGTTGAGATTGCTTTGGCTTTGAAGAAGGAACAAATGGAGGTTTTTTTATCTCTTTTTTATGGTCAATTTGAATCTTTTTGA 1407 0.4549 MMAQTPPPIKVHEVYKVSPSQTTTTTTTTTLPLTFFDIRWLRLPPVERLFFYAFPNPTISFFDFLLPNLKRSLELTLQHFFPLAGNITWPQHSPIPTITYVPGHDSVSLAFSESNDDFDHISSDFCEVSKRRRLVPSLSVSDDKTSLLALQVTLFPNSGFVIGITTHHAGVDGNCSTVFVKAWAYACSKIMEHPSLSTLPTISLPENLTPFLHRSVIKDAKGLAQSFSDAWMNFSGPNNRSVMLWGNKNNREEVQLDNNEPVKGIFELKPSHIQKLKNYVKSKTGIVKVSTFSVTVAYSLSCLVKAEQPEQEQVALVFPVDCRSRLEPVVSPTYFGNCLMGRLVLEETEKVMASEGFVTVLKGISEVLNGLESGVLNDVEKWQRKIESVFLEGKRAYSIAGSTRFGVYGVDFGYGRPKKVDVASVDKTGAFALSESRDGDGGVEIALALKKEQMEVFLSLFYGQFESF* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2679 468 Gene3D - 259 467 IPR023213 -
Ahy20g2679 468 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 6 467 - -
Ahy20g2679 468 PANTHER - 6 467 - -
Ahy20g2679 468 Pfam Transferase family 11 459 - -
Ahy20g2679 468 SUPERFAMILY CoA-dependent acyltransferases 287 425 - -
Ahy20g2679 468 Gene3D - 9 243 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2679 Ahy-Chr20 136521209 136522921 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2679 49 462 Monolignol Biosynthesis Gene Families AT5G48930 23.294 4.37e-20 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2679 - - gmx:100800849 471.47