Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy20g2650 | ATGGATGCACAAGCTAAGAAAAAGGCAGATTTTCGTGCTAAATTGGCCCAGAAGAAAGAAAAGCGTATAGATTCTCCCCTTGTAAGGTATAATGAATTCAATCAACCTGTTTGTCGGGTTTGTGATGTTGTTCTGAAGTCTGAATCTATATGGGATGCACACCAAATCTCCCGTAAGCATCGCGAGGCGATTGATAATCTTAAAGCTAATGCAGTTGGGTTAACTCAGCAAAACAATGCAAAGTCTGCTGCTGGTAACAGATTTCCCAAAGCCAAACCTGAACAACCTTCCGAACCACTATCCAAAAAGCCTGAACCTTCACAAGAAGTATCTAAAGCCCAGTCATCGTCTGTGCTTCCACCAAATTTTTTTGATGACAGTGCAAGGAAAACCAGAAGAAATGTGGGAGTTTCTGCTCAAAGTCAGGTGTCAAAGTTGGAGGAAAGAGATCATTTTCGTGGTCATGATGCTGCGCCGTCAAAGTTTAGTCAAGCAACAACAGAGACTAGGCAGACCTCAGCCAAAACTTCTGATCCAGAGGACAACCAAACAAAAGGATCTCTGCCTGAAGGCTTTTTTGACAATAAGGAAGCGGATTTGCGGGCACGTGGCATTAAGCCTGTGAAGCCAGATGTCAAGGATGAGTACAAGGAGTTTGAGAAGCTGATTCAAGAGGACTTGAAGGAGGTGGATGACCGATTGGAAGAAGAAGAGATTGATGCTGCTGAAATGATAGAAGAAGCTGAATCCGTTGAACAAAAGATCTTCAGGGAGAGAGTGGAAATGTTGAAGAAAAAGAGACTGGAGCTGAAAGCAGCAAAGTCGGCAAAGCGAGGTAAAACTTGTGAGGGTGAAACCAAGGAGGAGTCAAGGCATGAAGAAGAGTCATCCAGTGATGATGAAAGTGGTGAGAATTTTGCTGTGGACTGGAGAGCACAACACTTGTGA | 948 | 0.4378 | MDAQAKKKADFRAKLAQKKEKRIDSPLVRYNEFNQPVCRVCDVVLKSESIWDAHQISRKHREAIDNLKANAVGLTQQNNAKSAAGNRFPKAKPEQPSEPLSKKPEPSQEVSKAQSSSVLPPNFFDDSARKTRRNVGVSAQSQVSKLEERDHFRGHDAAPSKFSQATTETRQTSAKTSDPEDNQTKGSLPEGFFDNKEADLRARGIKPVKPDVKDEYKEFEKLIQEDLKEVDDRLEEEEIDAAEMIEEAESVEQKIFRERVEMLKKKRLELKAAKSAKRGKTCEGETKEESRHEEESSSDDESGENFAVDWRAQHL* | 316 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy20g2650 | 315 | Coils | Coil | 57 | 77 | - | - | |
| Ahy20g2650 | 315 | Pfam | Zinc-finger of C2H2 type | 38 | 60 | - | - | |
| Ahy20g2650 | 315 | Coils | Coil | 220 | 254 | - | - | |
| Ahy20g2650 | 315 | Coils | Coil | 1 | 21 | - | - | |
| Ahy20g2650 | 315 | MobiDBLite | consensus disorder prediction | 76 | 199 | - | - | |
| Ahy20g2650 | 315 | MobiDBLite | consensus disorder prediction | 272 | 315 | - | - | |
| Ahy20g2650 | 315 | MobiDBLite | consensus disorder prediction | 272 | 298 | - | - | |
| Ahy20g2650 | 315 | SUPERFAMILY | beta-beta-alpha zinc fingers | 30 | 71 | IPR036236 | - | |
| Ahy20g2650 | 315 | Gene3D | Classic Zinc Finger | 31 | 69 | - | - | |
| Ahy20g2650 | 315 | MobiDBLite | consensus disorder prediction | 160 | 184 | - | - | |
| Ahy20g2650 | 315 | MobiDBLite | consensus disorder prediction | 101 | 122 | - | - | |
| Ahy20g2650 | 315 | PANTHER | UNCHARACTERIZED | 1 | 315 | IPR040050 | GO:0003676|GO:0005681|GO:0008270 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy20g2650 | Ahy-Chr20 | 135950678 | 135954839 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ahy20g2650 | 1 | 315 | C2H2 Transcription Factor Family | AT3G02860 | 52.853 | 1.54e-94 | 281 |