Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2647 ATGTTGGGAATGAATAACCGTGTTGATCTGGTGGAGAAAATCACTCTGTGGAGAGAATCATGGAAAGTGCATGTTAAAATTGTGAAGTTGTGGTACCACAAGAATCCTACTTTGGATCCTTCTCAAAATCTGTTGCATATGGTCTTAATGGATGAGAAGTTACACAAGATCCAGGCAACCATTAGAGATCAGCTTACATCAAATTTTGCGGTGTCTCTAAATGAAGGGAATGTGTACTTGATGACCCATTTTACAGTTGTATCGAATACTGGTTTGAACAAAGTGACAAAACATCGGTTCAGACTTTTGTTCCAATACAAGATCTCTGTTGTTTCTGTGGTATCTCCAAGGATACCTCATTCGGGTTTGTGTTTTGTATCAATAGATGAAATTGATCAAATGACAAAGGATGATAATTTTCTCATTGACTTTGTTGGGATCATTACTGGTGTTCGAAAAGAAAGAGATGTAGCATCATATGGGAAGCTTATCAAAGCAGTGGTGCTAGAAGTCTTTACTGATGGCAAAAGGGTACAATGCAATGTGTTTGGAAATGCTTGTGATCTGTTGGAATATGATAACTTACAAAAATATCCAAGATCTCTGCTGATTGTCCTCGAGTCTTTTAAAATCAAAGCAATTGAAGGTGGGGTAATCCTACAGAATGTGATAAATGTCTCTAGGTTATTCATTAATCCTAACATTTCTGAGTTTGTTGAGTTCCTAAGCAGATTTAGTGTAGCCAGTTATGGATTCTCAAGACTTGTGACCAATGACCCTGGATACTTAGTTTCTAAAGTTGATGGTGATTATTTCAATCCCAAAGATATCAGTAATATTCAAGATCTTCATTCAGATAATGGGGATTCTCATTACTTTGTTATTGGGACAATTAAGGAAGTTATGGATGAACCAGATTGGTGGTACTACTCATGTGTGTGTGGTCATGCCGTTGTTGAGCATGAGGATCTCTACCTTTGTGATGCTTGTGGTTCATGTGTTGAACATGTTATGGTCAAGTGA 1023 0.3734 MLGMNNRVDLVEKITLWRESWKVHVKIVKLWYHKNPTLDPSQNLLHMVLMDEKLHKIQATIRDQLTSNFAVSLNEGNVYLMTHFTVVSNTGLNKVTKHRFRLLFQYKISVVSVVSPRIPHSGLCFVSIDEIDQMTKDDNFLIDFVGIITGVRKERDVASYGKLIKAVVLEVFTDGKRVQCNVFGNACDLLEYDNLQKYPRSLLIVLESFKIKAIEGGVILQNVINVSRLFINPNISEFVEFLSRFSVASYGFSRLVTNDPGYLVSKVDGDYFNPKDISNIQDLHSDNGDSHYFVIGTIKEVMDEPDWWYYSCVCGHAVVEHEDLYLCDACGSCVEHVMVK* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2647 340 SUPERFAMILY Nucleic acid-binding proteins 11 107 IPR012340 -
Ahy20g2647 340 CDD RPA1_DBD_A_like 22 105 - -
Ahy20g2647 340 Gene3D - 117 251 IPR012340 -
Ahy20g2647 340 Pfam Domain of unknown function DUF223 47 131 IPR003871 -
Ahy20g2647 340 Gene3D - 266 340 IPR012340 -
Ahy20g2647 340 Gene3D - 10 114 IPR012340 -
Ahy20g2647 340 SUPERFAMILY Nucleic acid-binding proteins 125 247 IPR012340 -
Ahy20g2647 340 SUPERFAMILY Nucleic acid-binding proteins 273 335 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2647 Ahy-Chr20 135907656 135909791 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2647 2 330 Core DNA Replication Machinery Family AT5G08020 22.254 1.30e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2647 - - ahf:112786446 686.797