Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2646 ATGGCAGAATCGCAAGAAGAACGTGTTTTAAGCGAGGGTCCTCCTTTATGCACATCACTTTGCCGAAATTCATTAATGGAGGTCAATATAGTTGAACCGTTAGTTTTTGTAGCATCTGGTATTTCAGAAAATTTACCATACGATAGAGAAAACTTAGCCGGCGATGTCGCAGGCCACGATCAGCAGTCGAACAAGGCCCTGCAACCGTCGGATATTAGTGAGGTTGGAAGTGAAGAGATGGAGCTTGGTGACGAGTTACCAGATCATGGTTGCCTTCAAGAAGATGAGATACCAAGAGTTGGCATACGGTTTGCGCAGCTAGAGATGGCTAATGACTTTTATGTTACCTACGCCAAGAAAATAGGATTTGCAACTAAGATACGGACGACAACATATGACAAGATCACAAAGATACCCGTTAACCAAGCTATCCACTGTAATCGCGACGGAATTTGTGGGTCTCGTGTCAAAGCACCAATACGGAAGAATACAATTTTTGCTGCTGGGTGCAAGGCAAGGATATATGTCAAGTTTGACAAAGACATGCAAGATTGGATTTTGTTCAAGGTTGACTTGAGGCACTCGCATCCTTGTTCAGCGAGAAAGGCTGTTCACTACCATGAGTATAGGAAGCTGAGCATGCATGCGAAGTGCGTGATCGAGAATAACGATGAGGCTGGGATTCGACCAAATAAGACCTTCCTAGCTTTGGCAAATGAGGCTGGAGGGCCGTCTAACCTGGGATTCTCAGAAAAATATTTAAGAAACTATATAACAGCGAGGCTCCGAACTAGCAACGTGGATGCTGATGTCAGGGAGATGATGAGCTACTTTATGAGGATGAAGGAGATCAATCCGAACTTCTTTTACGCGGTGAAGCTGGATGAAGATTGTAAATTTAGGAGTGCAGTATGGGTGGATGCAAGGTGTAGGGCGTCATATGAATACTACAGAGATGTCGTGTCTTTTGATAGCACCTACAGTACAAACAGGCATGGATTACCGTTTGTGTCGTTCGTTGGGGTCAAACATCATGGTAGGTCGACCCTCCTCGGTTGTGCTTTGCTGGGAAATGAGGAAATTGCAAGTTATGAGTGGGTTTTCAGCCAATGGGTGAAGTGCGTTGGTACTGTTCCACAGCGTATCATAACCGATCAATATCTGTATGATGACCGGCGCATGTGGGTCCCGATATGCTTCAAGTGTGAATTTTGGGCTGCCATGAGGAGTACGCAAAGAAGTGAGAGCATGCACGCATTCTACGGTGGATACTTACACAGTAAAACTAGCTTGGTTCAATTTGTTCACGAATATGACAATGTGCTTGGAGTGAAGGAGCAGAGGAAATTGGAGGATGATGCGGCAGACTTAAGGGGTGTTATCTCTTGTGCAACGAGCTCGCCTATTGAGAAACAGTTTCAACAAGAGTACACTACCAGCATGTTTAGGGATGTTCAAACGGAGTTCATAAAAAAGGCTAATTGCAGGGTCTCTATCGTTGTTGAAGATGGGCCATCGGTGTCCATCAGGGTAGAAGAGGAGAAATTAGTCAACGATACTATAATTTGCATTTCGTACGATCTACATTTTGACCGGACCACACAGGAGGTTCGGTGTGAGTGCAATCTGTTTGAGAGTTCAGGTGTGTTGTGCTATCACTGTCTTGAAGTTTTTCACTCGTATAAAGTTTACAAAGTACCTCCCTGTTATGTTCTCCCTCGATGGAGCAAGAAAGTAAAGTGCAAGCATACGTATGTCAGGAGTAGCCATGATGTCAGTCGGTCGGATGAGAGTCATGTTGCATTCATGGGACTTTGTGCACAGTTCTATAATGTTGCTCAAGAGTTCGTCGGTGACGATGACGAAACATCATTGCTACATGCTGCTTTGGATGAAACAAGGACCAAGTTGGCAGCACACCGTGCAAAGAAGAGGTCCGAGACCGTGTCCGATGCCCACGCCAGCTTCGGCTCACAGAGTTCAAATGACATTAGTGTTGATGACATCCAAGGCCCATCGAAGGTCGCCACAAAGGGCAGGCCAAAGAGTAAGAGGCTCGGCGCTGCCCTTGAAAATTCTTTCAAGAATTCAGCTCGGAGGAATCACAAGAAATCACCCCCGGTGTTTCGTCCTCACGCTTCGCAAGATGTAAACCTTCCTTCTGTTGTTGGTCGGAATGTTCCCTTACAAGTCGGTGGTTTCATGTCTTTGTTAAGCTCCTTCAACAAAAATTAG 2235 0.4541 MAESQEERVLSEGPPLCTSLCRNSLMEVNIVEPLVFVASGISENLPYDRENLAGDVAGHDQQSNKALQPSDISEVGSEEMELGDELPDHGCLQEDEIPRVGIRFAQLEMANDFYVTYAKKIGFATKIRTTTYDKITKIPVNQAIHCNRDGICGSRVKAPIRKNTIFAAGCKARIYVKFDKDMQDWILFKVDLRHSHPCSARKAVHYHEYRKLSMHAKCVIENNDEAGIRPNKTFLALANEAGGPSNLGFSEKYLRNYITARLRTSNVDADVREMMSYFMRMKEINPNFFYAVKLDEDCKFRSAVWVDARCRASYEYYRDVVSFDSTYSTNRHGLPFVSFVGVKHHGRSTLLGCALLGNEEIASYEWVFSQWVKCVGTVPQRIITDQYLYDDRRMWVPICFKCEFWAAMRSTQRSESMHAFYGGYLHSKTSLVQFVHEYDNVLGVKEQRKLEDDAADLRGVISCATSSPIEKQFQQEYTTSMFRDVQTEFIKKANCRVSIVVEDGPSVSIRVEEEKLVNDTIICISYDLHFDRTTQEVRCECNLFESSGVLCYHCLEVFHSYKVYKVPPCYVLPRWSKKVKCKHTYVRSSHDVSRSDESHVAFMGLCAQFYNVAQEFVGDDDETSLLHAALDETRTKLAAHRAKKRSETVSDAHASFGSQSSNDISVDDIQGPSKVATKGRPKSKRLGAALENSFKNSARRNHKKSPPVFRPHASQDVNLPSVVGRNVPLQVGGFMSLLSSFNKN* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2646 744 Pfam MULE transposase domain 320 386 IPR018289 -
Ahy20g2646 744 MobiDBLite consensus disorder prediction 651 668 - -
Ahy20g2646 744 PANTHER OS03G0843700 PROTEIN 78 385 - -
Ahy20g2646 744 PANTHER OS03G0843700 PROTEIN 387 618 - -
Ahy20g2646 744 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 78 385 IPR031052 GO:0006355
Ahy20g2646 744 Pfam FAR1 DNA-binding domain 112 198 IPR004330 -
Ahy20g2646 744 ProSiteProfiles Zinc finger SWIM-type profile. 526 562 IPR007527 GO:0008270
Ahy20g2646 744 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 387 618 IPR031052 GO:0006355
Ahy20g2646 744 MobiDBLite consensus disorder prediction 641 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2646 Ahy-Chr20 135887058 135891049 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g2646 FAR1 7.90E-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2646 - - adu:107491453 1026.54