Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2618 ATGATGGACAAGGAAAGTGAAGAATTGGCATTAACCCCAGAAGTGACTAAGCCGGATACGGTTGAAACAAGAAGGTTCTCTTCTGGCAAAGGATCTTCTGGAAATAGCACTGCAAAAGTTGTTCCTCGTTATCTCCGAGCTTCAACTGGTTCTTGTCATGATTTTTGTAAATATGGGAGGAAGCACGAACTTGAAGGGAATGAAAGGCGTTCTATACCTGATAGAGCTACACGAAAACAACTTTACCAGAGTTCTCAAAAGAGTATTGGGGGGATAATGACATCGGTTGCCAAACTCAGAGGGTCACTTGATTCAAGGTTGCCTTTTGTCAAACTACAAGAATCAATTGATTCCGAGCATGACATTTCCGATACTGCTGGCACCAATAAGCATGGACTGTCAACAAAATCATTCGACAAGGAAAAGCAAATAGGGAATGATGCTCCGGAAAACTGGAAGAAAACATCGTTGGTCAAGTTCAAACCCTCCCTCCTGAAATCCCATACATCTCCATTGGCAATACAGGAAATTTCAACGACTGCAAAGGAGGTGAAGCCTTCATTGAAATCAACTTCTCTCAAGTTGGAAACTTCACCAAAATCAGCTTCTAAGAAGGTGGAAGCTCCATCAAATTTAAGTTCCAAGAAGGTGAAAGCTCAATCAAAGTCAATTTCCAACAATGGGGAAACACCATCAAGATCAGATTCCAAGGTCAAAACTTCATCAAGATCAACTTCCAAGCCGGTGGAAACTTCGTCGGAGGCATCTTCTTTAAAGGGTAATAAGGACATGAAGTTGTCTGAAAAACGGGTAACTTCTTTGAGCCCAGACTCTGCCACAAGGAACACAATTTCAACTATGAAATCCTCGAAAAGCTTTGGTAGCAAAATGAATAGTGAGATCAAGATGGAAAAGGATGCAGCCTCTTCCAAAACAGCTTCAAGAAAATTGATAGCACCAATAAGGACCCCAGTGTCCCCAAGACCTTCTCTTGTAAGAGTTGCAAGTTTAAATTCAAGAAAGAATAAGAGCCTGAAAATCGTGTCTCGTCTTAAGAATCAGCAGAATGCCAGAAAAGTTGCACCTGAGGAATCCAACAATAATGACAATCAGGTCGAGGAAAAAACTCTGTACGTTATCAAGATGGAAAGTGGGAACAAAACTTTGGAATCTGATCAAAATCCAAGCTATGACAATGAACCATCCCTTCCGCAGATGTCACCACCAAACCCTTCACCGCCTTCAACTTCTGAATCTGTATCCCAAGAAGATCAAGAGGAATCTGACTATACAAGTAGTGAATTCGAGATGGATTCTTTCTCAAGTAACCATGAGCTTGAAAACATGGAAAATAGGGAGACTTTGGAAGTTGAGAAGGGAAAGCCGACAAAGGGTGGGATTGTGTGCTCCGATGATGCGGCCCAAGTGCTGAAATTGAAGTTCAGAAGGGGAAAAGTTGTCGATAATCAACTTGAGAGAAACACTCCAAGGAGGCTAAAATTTCGGAGAGCAAAACTGTTGGGGGAGAAAGCAAATCTTAAGGGTGGAAGGAAAAGCCTTAAAGGACTAGATGAAGGTTTTGCTGATGGAGCCGATGCTACAACTGGTCCAGAGAAGGTTGTCTTGAGACATCAAGATATGCAGGACAAGAAAGATGCTCAGGGATTGTTCAATAACGTGATCGAGGAAACGGCGAGTAAACTAGTCGAAGCACGGAAGAGCAAGGTTAAAGCATTGGTTGGTGCTTTTGAAACTGTAATCTCCCTACAAGAGAAGAAACCTCCTGCTAACACTGTCAGTTGA 1803 0.4221 MMDKESEELALTPEVTKPDTVETRRFSSGKGSSGNSTAKVVPRYLRASTGSCHDFCKYGRKHELEGNERRSIPDRATRKQLYQSSQKSIGGIMTSVAKLRGSLDSRLPFVKLQESIDSEHDISDTAGTNKHGLSTKSFDKEKQIGNDAPENWKKTSLVKFKPSLLKSHTSPLAIQEISTTAKEVKPSLKSTSLKLETSPKSASKKVEAPSNLSSKKVKAQSKSISNNGETPSRSDSKVKTSSRSTSKPVETSSEASSLKGNKDMKLSEKRVTSLSPDSATRNTISTMKSSKSFGSKMNSEIKMEKDAASSKTASRKLIAPIRTPVSPRPSLVRVASLNSRKNKSLKIVSRLKNQQNARKVAPEESNNNDNQVEEKTLYVIKMESGNKTLESDQNPSYDNEPSLPQMSPPNPSPPSTSESVSQEDQEESDYTSSEFEMDSFSSNHELENMENRETLEVEKGKPTKGGIVCSDDAAQVLKLKFRRGKVVDNQLERNTPRRLKFRRAKLLGEKANLKGGRKSLKGLDEGFADGADATTGPEKVVLRHQDMQDKKDAQGLFNNVIEETASKLVEARKSKVKALVGAFETVISLQEKKPPANTVS* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2618 600 MobiDBLite consensus disorder prediction 25 39 - -
Ahy20g2618 600 PANTHER EMB|CAB62594.1 480 597 - -
Ahy20g2618 600 MobiDBLite consensus disorder prediction 440 460 - -
Ahy20g2618 600 MobiDBLite consensus disorder prediction 332 374 - -
Ahy20g2618 600 MobiDBLite consensus disorder prediction 1 24 - -
Ahy20g2618 600 MobiDBLite consensus disorder prediction 386 401 - -
Ahy20g2618 600 MobiDBLite consensus disorder prediction 181 260 - -
Ahy20g2618 600 MobiDBLite consensus disorder prediction 271 297 - -
Ahy20g2618 600 MobiDBLite consensus disorder prediction 1 41 - -
Ahy20g2618 600 Pfam Plant calmodulin-binding domain 478 588 IPR012417 GO:0005516
Ahy20g2618 600 MobiDBLite consensus disorder prediction 134 148 - -
Ahy20g2618 600 PANTHER EMB|CAB62594.1 2 475 - -
Ahy20g2618 600 MobiDBLite consensus disorder prediction 181 466 - -
Ahy20g2618 600 MobiDBLite consensus disorder prediction 121 149 - -
Ahy20g2618 600 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 480 597 - -
Ahy20g2618 600 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 2 475 - -
Ahy20g2618 600 SMART CaM_binding_2 475 588 IPR012417 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2618 Ahy-Chr20 135413004 135416530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2618 538 586 Calmodulin-binding Proteins AT2G38800 46.000 9.96e-06 46.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2618 20 135413004 135416530 Ahy10g2127 10 109552396 109556027 hybridization
Ahy20g2618 20 135413004 135416530 Ahy14g2934 14 138096905 138100163 PCT
Ahy20g2618 20 135413004 135416530 Ahy4g2592 4 123861657 123864793 PCT
Ahy14g2934 14 138096905 138100163 Ahy20g2618 20 135413004 135416530 PCT
Ahy4g2592 4 123861657 123864793 Ahy20g2618 20 135413004 135416530 PCT