Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2608 ATGAAGAGGGTTCTGTTGCTTCTTGTGTTTGTTGCTTTTGCTTTCATTGTTATGGTTCCTGAAGCTTCTGCTAAGAGATGGCTTGTTGGTGATAACATGGGTTGGTCCTCTAGCTATGGTGTCAACTACACTAATTGGGCCAAGGGAAAGCATTTCTACAATGGTGATTGGCTATTCTTTGTGTATGATAGAAACCAAATGAATGTTCTAGAGGTGAACAAGACAGACTACGAAAAATGCAATTCTGATCACCCTCTTCACAATTGGACCACCGGTGCCGGAAGAGATGTCGTTCCATTAAACGTGACTCGAAACTACTACTTCATCAGTGGCAAGGGATTCTGCTTTGGCGGCATGAAGCTAGCTGTCCATGTCGAAAACCTGCCGCCGCCACCAAAGGCTTCCCCAGAAGTAGCTGGAGCACCACCGGCGTTGTACTCGAGAAGCCAGGTTGTTCTGTTGCCCGTTGTCTTCGCCGTTGGGGCGGCATGGGACACATTCATTCATCTTTGGTAG 516 0.4729 MKRVLLLLVFVAFAFIVMVPEASAKRWLVGDNMGWSSSYGVNYTNWAKGKHFYNGDWLFFVYDRNQMNVLEVNKTDYEKCNSDHPLHNWTTGAGRDVVPLNVTRNYYFISGKGFCFGGMKLAVHVENLPPPPKASPEVAGAPPALYSRSQVVLLPVVFAVGAAWDTFIHLW* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2608 171 SUPERFAMILY Cupredoxins 24 125 IPR008972 -
Ahy20g2608 171 Gene3D - 23 128 IPR008972 -
Ahy20g2608 171 Pfam Plastocyanin-like domain 35 119 IPR003245 GO:0009055
Ahy20g2608 171 ProSiteProfiles Phytocyanin domain profile. 25 127 IPR003245 GO:0009055
Ahy20g2608 171 PANTHER BLUE COPPER PROTEIN 5 163 IPR039391 GO:0009055
Ahy20g2608 171 PANTHER LAMIN-LIKE PROTEIN 5 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2608 Ahy-Chr20 135166021 135168663 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2608 1 171 Phytocyanin Superfamily AT5G15350 50.575 4.02e-60 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2608 - - mtr:MTR_6g013420 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2608 20 135166021 135168663 Ahy10g2120 10 109403310 109406420 hybridization