Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2593 ATGGGTTGCATCAATTCCAAGAATGCTGTGTCTGGGGACTCATCACCTTATTTATCACCTGTTGATCATGTGATTTTGGAACCTCTTCCTCCACCAGCAGTTTCAGTTGCAGGATCAAGGGGCCATTCTCATGTGGCAGGATCATCATTAGCAGATGAGAACAAGAAGAAATTGAAAAAGAACGCCTCCAAGAAGAGCAATGGCTCCTTTAGCATCAGGCTTGGATTCTCCAAGAGGCATGTTGATGCTGAACACAATGCTGCTGGTTGGCCAAGTTGGCTCACAGTTACTGCTGGTGAAGCTGTTCATGGATGGCTCCCTCTTAGAGCTGATTCTTTTCAAAAGTTAGATAAGATTGGACAAGGTACTTATAGCAGCGTGTTCAGAGCACGTGAAGTTGAAACAGGAAGGATGTTTGCTCTGAAGAAGGTGCGCTTTGACAATTTACAACCTGAGAGCATTAGATTCATGGCAAGAGAAATATCAATCCTTCGCAGGCTAGACCACCCAAACATCATGAAATTGGAGGGCATAATCACTTCTAAGCAATCTAGTAGCATATACCTTGTTTTTGAATACATGGAGCATGATCTTGCTGGCTTAGTATCGCGTCCTGATATTCTCTTCACTGACTCTCAGATAAAGTGTTACCTGCGACAGCTATTAAGTGGAATTGAGCACTGTCATATCCGTGGTATCATGCATCGTGACATTAAAGTATCAAATATCTTATTGAACAATGAAGGTATTCTCAAGATAGGAGATTTTGGATTAGCAAATACAATTAGTCCAAATAACAAGCATCAGTTAACCAGTCGTGTAGTAACTCTATGGTATCGCCCTCCTGAGCTCTTGATGGGATCAACCAATTATGGAGTATCGGTTGATTTGTGGAGTGTTGGTTGTGTATTTGCCGAACTTTTTCTAGGAAAACCAATCCTTAAGGGAAGAACTGAGGTTGAACAACTACACAAAATTTTTAAGCTGTGTGGATCTCCGCCGGACGATTTCTGGAAAAAGTATAAGCTTCCTCATGCAACAGTATTTAAACCTCAAACTACTTACGAAAGCTCTTTGCGTGAGAGGTGTGCCGAGTTTCCAGAAACTGCTGTTGATCTACTTGAGACTTTATTATCCATTGACCCCGCCAATCGTGGAACCGCCTCCTCTGCCCTGATGTCTGAGTATTTCAACACCAAACCTTATGCTTGCAATCCATCAAACTTGCCAAAGTATTCGCCTAGCAAAGAACTGGATGCTAAAAGTCGGGAAGACATGTCGAGGAAAAGGACCGATGATAAAATGCAAATGCGAGATGCTGCAACATCGAGAAGGCAACCAAGACGAGTCAAGAAATATTTGCGAGAACCAATTGATCATACTCAATCAGTTTCCAAAGAGAATGGTCCTCATAATGTTCGTAGAAGTGATGGTAGATCACATATTCAAAAGGGCATAGGAGGACACAAAGACCATCTACACCCCGAAATGGATGCAGTCTCAGACCTTTCGCAGATGGTGAATATTGCAGATGGTAATGGCTTTACTGTACCGGCACAAGGCGGCTATGACTGGGTGAAAAGGAGAAAGCAAGATGCTTCATCTACACTATCAGATGGCTCAAGAAGCAAAATTAGTGCATTGGATCCAAACTTTGCTAAAGGAACTTATGATTTAAACAGACAAAGGATGACTGCTTTGGACAAGAGATATAATGACAAGCAAGGTTACCATGAAGAGACTCGCGTAACGATGGATTTTGATCCTTCCGAACTATTGAATCATCAGGGAAATACAGATCATGGTTCGCAAGTGAGTGACATGCGGCGCGAAGTTCGAAAATCAAGGTTTGGAAGAGAGATATGA 1866 0.4234 MGCINSKNAVSGDSSPYLSPVDHVILEPLPPPAVSVAGSRGHSHVAGSSLADENKKKLKKNASKKSNGSFSIRLGFSKRHVDAEHNAAGWPSWLTVTAGEAVHGWLPLRADSFQKLDKIGQGTYSSVFRAREVETGRMFALKKVRFDNLQPESIRFMAREISILRRLDHPNIMKLEGIITSKQSSSIYLVFEYMEHDLAGLVSRPDILFTDSQIKCYLRQLLSGIEHCHIRGIMHRDIKVSNILLNNEGILKIGDFGLANTISPNNKHQLTSRVVTLWYRPPELLMGSTNYGVSVDLWSVGCVFAELFLGKPILKGRTEVEQLHKIFKLCGSPPDDFWKKYKLPHATVFKPQTTYESSLRERCAEFPETAVDLLETLLSIDPANRGTASSALMSEYFNTKPYACNPSNLPKYSPSKELDAKSREDMSRKRTDDKMQMRDAATSRRQPRRVKKYLREPIDHTQSVSKENGPHNVRRSDGRSHIQKGIGGHKDHLHPEMDAVSDLSQMVNIADGNGFTVPAQGGYDWVKRRKQDASSTLSDGSRSKISALDPNFAKGTYDLNRQRMTALDKRYNDKQGYHEETRVTMDFDPSELLNHQGNTDHGSQVSDMRREVRKSRFGREI* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2593 621 PANTHER CELL DIVISION PROTEIN KINASE 1 565 - -
Ahy20g2593 621 Gene3D Transferase(Phosphotransferase) domain 1 196 437 - -
Ahy20g2593 621 SMART serkin_6 113 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2593 621 MobiDBLite consensus disorder prediction 407 479 - -
Ahy20g2593 621 MobiDBLite consensus disorder prediction 590 621 - -
Ahy20g2593 621 PANTHER CYCLIN-DEPENDENT KINASE 1 565 - -
Ahy20g2593 621 SUPERFAMILY Protein kinase-like (PK-like) 107 402 IPR011009 -
Ahy20g2593 621 MobiDBLite consensus disorder prediction 604 621 - -
Ahy20g2593 621 Pfam Protein kinase domain 113 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2593 621 ProSiteProfiles Protein kinase domain profile. 113 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2593 621 MobiDBLite consensus disorder prediction 35 66 - -
Ahy20g2593 621 Gene3D Phosphorylase Kinase; domain 1 100 195 - -
Ahy20g2593 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Ahy20g2593 621 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Ahy20g2593 621 MobiDBLite consensus disorder prediction 416 462 - -
Ahy20g2593 621 CDD STKc_CDK9_like 113 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2593 Ahy-Chr20 134920389 134926232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2593 105 447 Core Cell Cycle Gene Families AT5G10270 45.856 1.30e-108 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Ahy20g2593 Pkinase 5.30E-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2593 - - gmx:100790917 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1949 11 125580619 125584959 Ahy20g2593 20 134920389 134926232 ECH
Ahy20g2593 20 134920389 134926232 Ahy20g2593 20 134920389 134926232 ECH
Ahy20g2593 20 134920389 134926232 Ahy10g2108 10 109259048 109264293 hybridization