Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2591 ATGGATGGACCAACTGGCCGAGGTAGTGGAACAGGTGTAGACATGTTTCTGCCAAATTATAAGCTGGGAAAAACACTTGGTATTGGGTCCTTTGGCAAAGTGAAAATAGCAGAGCATGTTTTGACTGGCCATAAAGTTGCCATAAAGATTCTTAACCGCCGCAAGATTAAGAACATGGAAATGGAAGAAAAAGTAAGAAGAGAAATAAAAATTCTGAGATTGTTCATGCATCCTCACATCATCCGTCTTTATGAAGTCATAGAAACGCCAACAGACATATATGTTGTTATGGAATATGTAAAATCAGGAGAACTATTTGATTATATAGTAGAAAAGGGCAGGCTGCAAGAAGATGAAGCCCGCAACTTTTTCCAGCAGATAATCTCTGGTGTGGAGTACTGTCACAGGAATATGGTGGTACATAGAGACCTGAAACCTGAGAATTTGCTTTTAGACTCCAAATGCAATGTCAAGATTGCTGATTTTGGTTTAAGCAACATCATGCGGGATGGCCACTTTCTGAAGACAAGTTGTGGGAGCCCTAATTATGCTGCTCCAGAGGTTATCTCTGGGAAATTGTATGCTGGACCTGAAGTAGATGTCTGGAGCTGTGGTGTAATTCTATATGCCCTTCTCTGCGGCACACTTCCCTTTGATGATGAAAACATTCCAAACCTCTTCAAGAAAATAAAGGGTGGCATATACACCCTTCCTAGTCATCTATCACCTGGTGCTAGAGATTTGATACCAAGGATGCTTGTGGTGGATCCCATGAAGAGGATGACTATACCTGAAATACGTCAACACCCATGGTTCCAAGCTCGTCTTCCGCGATATTTAGCAGTGCCACCACCAGATACAATGCAACAAGCCAAAAAGATTGACGAAGAGCTACTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTTGAATCTCTACGCAACAGGATCCAAAATGAGGGTACTGTGGCATACTACTTGTTATTGGATAACCGGTTCCGTGTTTCTAGCGGCTATCTTGGAGCTGAGTTTCAAGAGACTATGGATGCTGGTTTCAATCGTAATCATTCCACTGAAGTTTCTTCTCCAGTTGCTGGGCACCGCTTTCCAGGTTATATGGACTATCAAGTAGGAATGAGACCACAGATCCCTGTTGAGAGAAAATGGGCCCTTGGGCTTCAGTCTCGAGCCCATCCCCGTGAAATAATGACCGAGGTCCTTAAAGCTCTGCAAGAATTAAATGTTTGCTGGAAGAAGATAGGGCATTACAACATGAAATGCAGATGGGTTGCTGGCATTCCTGGTCATCAGGAAGGAATGGTTAACAATTCTCTGCATAGTAACCATTACTTTGGGAATGACTCCAACATCATTGAGAATGATGCTGTTTCTAAGTCAAATGTGGTCAAGTTTGAAGTGCAGCTCTACAAAACTCGGGAAGATAAGTATCTGCTTGACCTTCAGAGGGTTCAGGGCCCCCAGTTTCTTTTCTTGGATCTTTGTGCTGCTTTCCTTGCACAGCTACGTGTTCTCTAA 1545 0.4278 MDGPTGRGSGTGVDMFLPNYKLGKTLGIGSFGKVKIAEHVLTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRMTIPEIRQHPWFQARLPRYLAVPPPDTMQQAKKIDEELLQEVVNMGFDRNQLVESLRNRIQNEGTVAYYLLLDNRFRVSSGYLGAEFQETMDAGFNRNHSTEVSSPVAGHRFPGYMDYQVGMRPQIPVERKWALGLQSRAHPREIMTEVLKALQELNVCWKKIGHYNMKCRWVAGIPGHQEGMVNNSLHSNHYFGNDSNIIENDAVSKSNVVKFEVQLYKTREDKYLLDLQRVQGPQFLFLDLCAAFLAQLRVL* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2591 514 SMART uba_6 295 332 IPR015940 -
Ahy20g2591 514 CDD STKc_AMPK_alpha 17 272 - -
Ahy20g2591 514 CDD UBA_SnRK1_plant 294 334 - -
Ahy20g2591 514 SUPERFAMILY UBA-like 282 331 IPR009060 GO:0005515
Ahy20g2591 514 SUPERFAMILY KA1-like 329 513 IPR028375 -
Ahy20g2591 514 Gene3D Kinase associated domain 1, KA1 395 512 - -
Ahy20g2591 514 Pfam Kinase associated domain 1 471 513 IPR001772 -
Ahy20g2591 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Ahy20g2591 514 CDD AMPKA_C 389 511 - -
Ahy20g2591 514 Pfam Protein kinase domain 20 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2591 514 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Ahy20g2591 514 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 293 333 IPR015940 -
Ahy20g2591 514 ProSiteProfiles Protein kinase domain profile. 20 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2591 514 SUPERFAMILY Protein kinase-like (PK-like) 17 288 IPR011009 -
Ahy20g2591 514 Gene3D Transferase(Phosphotransferase) domain 1 11 351 - -
Ahy20g2591 514 PANTHER SERINE/THREONINE KINASE 9 513 - -
Ahy20g2591 514 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 465 513 IPR001772 -
Ahy20g2591 514 Pfam UBA/TS-N domain 294 330 IPR015940 -
Ahy20g2591 514 SMART serkin_6 20 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2591 514 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 9 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2591 Ahy-Chr20 134900773 134907184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2591 20 272 CBL-interacting serine-threonine protein kinases AT4G24400 52.756 1.10e-93 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Ahy20g2591 Pkinase 9.30E-81 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2591 K07198 - gmx:100796687 979.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2591 20 134900773 134907184 Ahy10g2106 10 109237588 109244109 hybridization