Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2584 ATGGAGGCTTCGCATTCTGTTAAGGTTATAACGGTGTCACAGGACGGAAAAGGAGACTACCGGACGGTGCAGGAGGCGATCGATGCGGTGCCGGTAGGCAACACTCGCCGGACGGTGATCCGGGTGGCCCCGGGAATCTACAGGCAGCCTGTTTATGTGGCGAAGACAAAGAGGTTCATCACGCTTGCCGGCATATTTCTTGAGGACACTGTTCTCACATGGAATAACACTGCTACAAGAATCCAACACCCCAAAGGTGAAAAGGTGATAGGAGGAGGAACGTTTGGTTGTGGCAGCACCATTGTGGAAGGTGAAGACTTCATTGCTGAGAACATTACCTTCGAGAATTCTTCCCCTCAGTGTGAGGTTGTTTTTGGTGGAAGGAAGGGTTCAGGGCAAGCTGTGGCTATGAGAGTAACAGCTGATCGATGTGCTTTCTATAATTGCAGGTTCCTTGGATGGCAGGACACACTGTATTTACATTATGGCAAACAATATTTTAGAGATTGCTACATTGAAGGAAGTGTGGACTTCATTTTTGGCAATAGCACTGCCCTCTTGGAGCATTGTCATATCCACTGCAAATCCCAAGGCTTCATAACAGCACAGAGCAGAAAATCTCCACATGAAACAACTGGTTTTGTGTTCCAAAGATGTGTTATCACAGGTAATGGGGGAAGGGAATATGCATATCTTGGAAGACCATGGGGACCCTTTGCAAGAGTGGTCTTTGCATTCACTTATATGGATCCATGTATACAACTTGCTGGTTGGAACAATTGGGGTAATGCTGACAATGAGAAAACTGCTTGCTTTTTTGAATACAGGTGTTTCGGGCCGGGTTATTGCCGATCAAAACGGGTCAAATGGGCCAGAGAAGAAGCAGAACAGTTCTTGCTTCATAGCTTCATTGATCCAGAAGCAAATAAACCTTGGCTTGCTCAAAGAATGGCTTTCAAGGTTCCATATTTTGCTTAG 978 0.4611 MEASHSVKVITVSQDGKGDYRTVQEAIDAVPVGNTRRTVIRVAPGIYRQPVYVAKTKRFITLAGIFLEDTVLTWNNTATRIQHPKGEKVIGGGTFGCGSTIVEGEDFIAENITFENSSPQCEVVFGGRKGSGQAVAMRVTADRCAFYNCRFLGWQDTLYLHYGKQYFRDCYIEGSVDFIFGNSTALLEHCHIHCKSQGFITAQSRKSPHETTGFVFQRCVITGNGGREYAYLGRPWGPFARVVFAFTYMDPCIQLAGWNNWGNADNEKTACFFEYRCFGPGYCRSKRVKWAREEAEQFLLHSFIDPEANKPWLAQRMAFKVPYFA* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2584 325 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 9 323 - -
Ahy20g2584 325 SUPERFAMILY Pectin lyase-like 8 308 IPR011050 -
Ahy20g2584 325 PANTHER PECTINESTERASE 9 323 - -
Ahy20g2584 325 Gene3D - 4 320 IPR012334 -
Ahy20g2584 325 ProSitePatterns Pectinesterase signature 2. 172 181 IPR033131 -
Ahy20g2584 325 Pfam Pectinesterase 10 297 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2584 Ahy-Chr20 134787339 134793195 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2584 8 318 Carbohydrate Esterase AT5G47500 38.994 5.24e-70 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2584 K01051 - gmx:100810259 530.791