Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2582 ATGCTTACTTTTGTACAAGATGTGCCCAAGGTTGGCATGTGTTTTGGAACCCTTGATGATGCAAATCAATTTTATCAGAATTATGCCAAGCGCGTTGGTTTTGTTATTAAGATAAGGTTTACCCGAAGAGTTGGTAAAGATAAGGTTCCTAAGAATCAAATGATCACTTGCAATAGGGAAGGAAAACGCAAGTCTAGAGTTTCACCAATAGAAAAGACCAACTCTAGAACCAACTACAATTTCCCCGCGAGGATTTCTATTAGGTTGAATAAGGAGGGTCTTTGGGTTATATCCAAGGTGTGTTTGGATCATTCACATCCTTGTGATCCGGAGATGGCAAAATTGTTGACACCTAATAGAGAGATGAATATGTACATGTGTCGAGTCATTGAGAGGAATGATGAAGCAGGCGTGAGACCAAGCAAAACATCTCAAGTGTTGGTGGATGAAATGGGAGATTTCTCTAAGATAAGCTTAATGGAAAAAGATGTTAGGAACTATTTCAGTAGAAAGGTACGCAATGTTACGGAAGAAATGGATGCTAGGAAGATGTTGAAGTATTTTACACGGATAAAGGATATGAACTCTGATTTTTATTTTAATCTTGAACTTGATCAAATCAAGCGTTTCAAAACTATATTTTGGGCTGAAGCTCGAAGTAGAGCAGCATACGAGTACTTTGGTGATGTAGTTTCGTTTGATACTACTTATAAAACTAATCGTTACAATATGCTATTTGGTTCCTTTGTGGGGCTTAATCACCATGGTAACTTAGTGCTTCTTGGGTGTGGTTTAATGACTAAGGAAAATTTCGGCTCGTTTACTTGGTTATTTAATGCTTGGCTTAGATGTATGCATGGAAAGGCGCCTAAAAGCCAATGCCTCGGAATGCGAGCTGGAATTGAGAATGTGATGCCAGGACACGTCATAGGTTATGCATTTGACACACTTTGA 954 0.3868 MLTFVQDVPKVGMCFGTLDDANQFYQNYAKRVGFVIKIRFTRRVGKDKVPKNQMITCNREGKRKSRVSPIEKTNSRTNYNFPARISIRLNKEGLWVISKVCLDHSHPCDPEMAKLLTPNREMNMYMCRVIERNDEAGVRPSKTSQVLVDEMGDFSKISLMEKDVRNYFSRKVRNVTEEMDARKMLKYFTRIKDMNSDFYFNLELDQIKRFKTIFWAEARSRAAYEYFGDVVSFDTTYKTNRYNMLFGSFVGLNHHGNLVLLGCGLMTKENFGSFTWLFNAWLRCMHGKAPKSQCLGMRAGIENVMPGHVIGYAFDTL* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2582 317 Pfam MULE transposase domain 230 292 IPR018289 -
Ahy20g2582 317 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 8 307 - -
Ahy20g2582 317 Pfam FAR1 DNA-binding domain 23 109 IPR004330 -
Ahy20g2582 317 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 307 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2582 Ahy-Chr20 134751211 134754781 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g2582 FAR1 2.90E-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2582 - - ahf:112705389 540.421