Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2551 ATGGCTGCTGCTATTGTGGGAGGGTCATTACTCTCTGCTTCTGTTCAGGTGGTGTTGGATAAGATCATTTCCAATGAGTTCTTGGACTTCTTTAGGAGAAGGAAGCTTAATGTTTCACTTGTTGGAAAGATGAAGATGACATTGCTGAGTGTTCAAGCTGTTCTAAATGATGCTGAGGAGAAGCAGATCACAAATCCTGCTGTCAAGGAATGGCTGAATGAGCTCACACAAGCTGTCTTTGATGCTGAAGATTTGTTGGATGAAATCAACACTGAGGCTCTTGGATGCAAAGTGAAAGCCAGGTATCAAAGTCCATCGTGCAGTGCCAAGGTGCGAAATGTCTTTTCCTCTCGTTTCGGACGATCATATGGTGTGATCAATTCTAAAATGCAGACATTATTTGAAAGACTAGAGCACTTTGCACAGCAAATACACATCCTTCAACTGAAAGAAGGTGTTTCCAACAGTGTTTGGCAAGGGATGCCCACAAGTTCTGTGGTCGACGAATCTGTCATTTATGGAAGAGATGATGAGAGAAAGAAACTTAGAGAGTATTTGCTGTCAGAAGATGTTGGTGCTAGTGGCAATAAAATAGGAGTGATTTCAATTGTCGGCATGGGAGGGATTGGAAAAACAACCATTGCTAAACTCCTATACAATGATGATGAAGTTAAAGACAAGTTTGATTTAAAAGCATGGGCATGTGTTTCAAAGGATTTTGATGTTTTCAGGGTCACTAAGACTGTGCTTGAATCGGTTACCTCAAAAACAACAAATACTGATAACTTGAATACTCTGCAAGTGGAATTGCAGCAAAGGTTGTGGCGGAAAAGATTTTTGCTAGTGTTGGATGACATTCGCGGCACAAGCTATGTTGATTGGGCCAATCTAAAGGATATTTTTAATGCTGGAGAAATGGGAAGTACAATCATTGTCACAACACGAGATGAAAACGTTGCAAAAGCTATGCAAACCTTTCCTATCTTCCATTTGACATCTCTTGATAGTGAAGATTGCTGGTCTTTACTTGCTGAACACGCATTTGGAGCAAATAATTCCAGTGAACGGTCCAACCTAGAAGGAATTGGAAGAGAAATTGTGAAAAAATGTGATGGTTTGCCTTTAGCTGCAGTTGCATTGGGGGGTCTTCTTCGCACCAAATTGTCGAAAAATGATTGGAATAAGGTACTTAGAAGTAACATTTGGGATCTGCCAAATTTGAATGTGCAACCTGCTCTGCTACTAAGCTATCATTTCCTTCCGGCTACTTTGAAACGTTGCTTTGCTTACTGTTCAATTTTTCCAAAGAACTCAGCCTTAGAAAAAGAGATGGTAGTTCGGCTATGGATCGCAGAAGGCTTAGTACATGTGTCAAAAAGTAAGAAAATCCTGGAAGAAGTTGGTGACGAATACTTTGATGAACTAGTATCAAGGTCACTAATTCGTCGACGGTCCATGGATGGGAAAAGCTTCGAAATGCATGACCTCATCAATGATTTAGCTGCAATGGTTTCATCTGCTTATTGTATCAGGTATGAGGATCAAAAGGCACTTGAAAATCCGAAAAAAGTTCGACATTTGTCATACAACAGAAGTTGGTATGACTATTTCAATAAATTTAATTCCTTTTATGGTTTAGAAGGCCTGCGCACCTTCCTTCCCTTACCATTGAATGGATGGTCATTTGACTATTACCTATCAAACAAGGTAATATATGACTTGTTGCCCAAGTTAAAACAGTTGCGGGTATTATCTTTGTCACACTACAAGAATATCTCTGAGTTACCAGACTCCATTGGAGGTTTAAAACATTTGCGGCATCTAGATCTCTCTGGCACTAACATTAAAAGGTTGCCTTCTGTGATTTGCAAGCTCTACAATCTACAGACCTTGCTGTTGTCTGATTGTAAGTTTCTCACTGAATTACCTGAGGAGATAGGAATGTTGGTGAATCTTCGCCACCTCGACATTAGTGGAACTCAATTGCAGGAGATACCGGCACAAATAGCAAGACTAGAAAATCTCCAAACTTTATCTGGGTTTGTTGTTAGCAGACAGCAAAATGGATTGAAGGTGGGAGAATTGCAAAAATTTCCCAATTTGCAGGGGAAGCTCTGCATTTCAAAGCTACAAAACATTGTCGACCCTTGTGATGCTTCACAAGCCAATATGAAGAAGAAAGAACAAATTGAAGATCTATCATTAGAATGGGATAGCTGCACTGCTCAAGAGTCCCAACATCTTGTATTGGAGCACCTGCAGCCTTCAACAAACTTGAAGAAACTAACCATCAAATTCTATGGTGGAACCTGGTTTCCCAACTGGTTAGGTAATTCCTCATTTGCAAACATGGTGTATTTGTGCATCCGAAGTTGTCACTATTGTTCATTACTACCACCTGTTGGACAGCTTCATAATCTTAAAGAACTCATCATATTTGATATTATCTCAGTGAAGACTATTGGTCCTGAATTTTATGGATGCTGTTCTCCTTCATTTCAACCATTTCCCTCCTTGGAGACACTGAGTTTTGGAGAGATGCCGGCGTGGGAGGAATGGAACTTCATGGGTGGTATAGCTACACACTTCCCTCGTCTTTCTCATCTGTCTCTAAGCGATTGTCCGAAACTCAAAGGAAATTTACCCAGCAACCTTCCTTCCTTGACTAAACTTCATTTGTCCAGTTGTTCTCTACTTGAGTCACAATTTTCTGTTGAACTGGATAACAGAAACATTATCAATGCATCAAATCTATTCAGTGAATTAATGCTTGGTCTTAATTCTCTTGAACAATTACATATCGAAGGCATTCCTTCTCGGACCGCCTTCCCTAGAGATGGTCTGCCGGAAACGTTAAGAGTTCTGTTCCTCAAAAATTGTGAGAACTTTGAATTTCCAAATCATGAATCCCTGCGTAGTTACACGGCACTTGAATCTTTGACAATATGGAATAGTTGTTGCTCACTGACATCATTTCCCTTAGGCTCTCTCCCTGTGCTCAAGTGGCTCTACTTTATAGAATGTAAGAATCTGAAATCATTTTCAATTTCAGAAGAAGAAGATGCACTCCAGTGTCTCACATTTCTTCAAGGTTTCTACATTCTAGAATGTCCTGAACTTGAATCATTTCCTCATCTTGGATTGCCGACTCCTAAGCTCAGACGTTTTTGGGTGTCATATTGCAACAAGCTTAATTCACTACCAGAACCGGTTAATGCTCTTGTTGGCCTTCAAGAATTGACAGTTCTTAACCTCCCAAGTATGCAATTTTTTGCAAATGAAGGTCTTCCTATCAGTTTGCGAACACTTCGAATCGGCAATCTTGGAGGGATTTTCTCAAATGCAGATATCATTAAATGGGGCCTTGACCATCTTACTTGCCTTTCAGAGTTAGAAATTGAAGGTGGTTATCTGGTTAACATGATAATGAAGATGGAAGTGCCACTATTACCCTCTACTCTTATCTCCCTACACATCTATCATCTTGATGGTATAAGACATTTGGATGGGAAATGGCTTCAGAATCTGACTTCTCTTGAATGTCTTAAGATCTCATCTTGTGATAGCTTGGAGTCATTGCCACAAGAAGGATTGCCTTCATCTCTTTCGGTATTGACTATAGGGAGTTGTCCATTGTTAGAAGCGAGTTGTCGGAGTAATGGGGGGAAAGAGTGGCCTAAAGTTGCTCACATTCCTTGCATTATTATGGATAAGAAGGTCATCATTTGA 3729 0.4014 MAAAIVGGSLLSASVQVVLDKIISNEFLDFFRRRKLNVSLVGKMKMTLLSVQAVLNDAEEKQITNPAVKEWLNELTQAVFDAEDLLDEINTEALGCKVKARYQSPSCSAKVRNVFSSRFGRSYGVINSKMQTLFERLEHFAQQIHILQLKEGVSNSVWQGMPTSSVVDESVIYGRDDERKKLREYLLSEDVGASGNKIGVISIVGMGGIGKTTIAKLLYNDDEVKDKFDLKAWACVSKDFDVFRVTKTVLESVTSKTTNTDNLNTLQVELQQRLWRKRFLLVLDDIRGTSYVDWANLKDIFNAGEMGSTIIVTTRDENVAKAMQTFPIFHLTSLDSEDCWSLLAEHAFGANNSSERSNLEGIGREIVKKCDGLPLAAVALGGLLRTKLSKNDWNKVLRSNIWDLPNLNVQPALLLSYHFLPATLKRCFAYCSIFPKNSALEKEMVVRLWIAEGLVHVSKSKKILEEVGDEYFDELVSRSLIRRRSMDGKSFEMHDLINDLAAMVSSAYCIRYEDQKALENPKKVRHLSYNRSWYDYFNKFNSFYGLEGLRTFLPLPLNGWSFDYYLSNKVIYDLLPKLKQLRVLSLSHYKNISELPDSIGGLKHLRHLDLSGTNIKRLPSVICKLYNLQTLLLSDCKFLTELPEEIGMLVNLRHLDISGTQLQEIPAQIARLENLQTLSGFVVSRQQNGLKVGELQKFPNLQGKLCISKLQNIVDPCDASQANMKKKEQIEDLSLEWDSCTAQESQHLVLEHLQPSTNLKKLTIKFYGGTWFPNWLGNSSFANMVYLCIRSCHYCSLLPPVGQLHNLKELIIFDIISVKTIGPEFYGCCSPSFQPFPSLETLSFGEMPAWEEWNFMGGIATHFPRLSHLSLSDCPKLKGNLPSNLPSLTKLHLSSCSLLESQFSVELDNRNIINASNLFSELMLGLNSLEQLHIEGIPSRTAFPRDGLPETLRVLFLKNCENFEFPNHESLRSYTALESLTIWNSCCSLTSFPLGSLPVLKWLYFIECKNLKSFSISEEEDALQCLTFLQGFYILECPELESFPHLGLPTPKLRRFWVSYCNKLNSLPEPVNALVGLQELTVLNLPSMQFFANEGLPISLRTLRIGNLGGIFSNADIIKWGLDHLTCLSELEIEGGYLVNMIMKMEVPLLPSTLISLHIYHLDGIRHLDGKWLQNLTSLECLKISSCDSLESLPQEGLPSSLSVLTIGSCPLLEASCRSNGGKEWPKVAHIPCIIMDKKVII* 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2551 1242 Gene3D - 155 326 IPR027417 -
Ahy20g2551 1242 SUPERFAMILY L domain-like 493 902 - -
Ahy20g2551 1242 Pfam NB-ARC domain 197 397 IPR002182 GO:0043531
Ahy20g2551 1242 Gene3D - 416 503 IPR036388 -
Ahy20g2551 1242 Coils Coil 72 92 - -
Ahy20g2551 1242 Gene3D Ribonuclease Inhibitor 1049 1220 IPR032675 -
Ahy20g2551 1242 Gene3D Ribonuclease Inhibitor 699 882 IPR032675 -
Ahy20g2551 1242 Gene3D Ribonuclease Inhibitor 883 1048 IPR032675 -
Ahy20g2551 1242 Gene3D - 32 125 - -
Ahy20g2551 1242 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 431 IPR027417 -
Ahy20g2551 1242 PRINTS Disease resistance protein signature 200 215 - -
Ahy20g2551 1242 PRINTS Disease resistance protein signature 273 287 - -
Ahy20g2551 1242 PRINTS Disease resistance protein signature 883 899 - -
Ahy20g2551 1242 PRINTS Disease resistance protein signature 370 384 - -
Ahy20g2551 1242 SUPERFAMILY L domain-like 925 1229 - -
Ahy20g2551 1242 Gene3D Ribonuclease Inhibitor 504 698 IPR032675 -
Ahy20g2551 1242 Gene3D - 333 415 IPR042197 -
Ahy20g2551 1242 Pfam Rx N-terminal domain 11 102 IPR041118 -
Ahy20g2551 1242 ProSiteProfiles Leucine-rich repeat profile. 604 625 IPR001611 GO:0005515
Ahy20g2551 1242 PANTHER DISEASE RESISTANCE PROTEIN RP 26 938 IPR044974 GO:0006952
Ahy20g2551 1242 SMART LRR_typ_2 649 672 IPR003591 -
Ahy20g2551 1242 SMART LRR_typ_2 602 625 IPR003591 -
Ahy20g2551 1242 PANTHER OS05G0414200 PROTEIN 26 938 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2551 Ahy-Chr20 134041395 134046324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2551 198 716 WRKY Transcription Factor Family AT5G45050 23.810 2.27e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2551 - - ahf:114924557 1592.79