Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2549 ATGGCTGTCTCAGTTTCAGACAGAAGCAGCCATTCTTCTTCTTCTCTGATCCCCAGCTTCCTCTACTCCTCCTCTTCCTCTTCTTTGTCGTCTTTGTCATCAGGTTCTTCAGGTCAGAACTTTATGATTGGTTCTCCCAAGGAACCTTCCGGAAGACGAATTGAGATGTTCTCGCCGGCGTACTATGCTGCTTGCACCGTCGGGGGAGCCCTCTGCTGTGGCCTCACTCACACGGCGGTTACGCCTCTTGACCTTGTCAAATGTAACATGCAGATTGACCCTGTTAAGTACAAGAGCGTCTCTTCTGGATTCGGAGTTTTGTATAGGGAACAAGGGCTTAGGGGATTTTTCAGGGGATGGGCACCTACCCTTCTCGGGTACCATGCCCAAGGTGCCTTCAAATATGGACTCTATGAGTACTTCAAGAAATACTATTCCGATCTTGCTGGCCCTGAGTTTGCAACTAAGTATAAGACCCTCATCTACCTTGCCGGTTCGGCGTCTTCCGAGTCCATTGCTGGGCTTGCACTCTGTCCGTTTGAGGCCGTCAAGGTTCGAGTTCAGACTCAGCCTGGCTTCGCCAGAGGACTCTCCGATGGCCTGCCTAAGTTGGTCAGAGCGGAAGGAGTCTCAGGGCTGTACAAGGGACTTGTACCTCTGTGGGGACGGCAGATTCCATATACAATGATGAAGTTTGCTTCATACGAGAACACAGTGGAGATGATATATAAGCATATGATTCCCACAACAAAGGAAGAAAGCAGTAAAATGGTGCAACTTGGTGTGAGCTTTGCAGGTGGATACATAGCTGGAATATTATGTGCCCTTGTCTCTCATCCTGCTGACAACCTTGTCTCTTTCCTCAACAATTCTAAAGGGGCAACTGTTGCTGATGCTGTTAATAGGCTTGGATTATGGGGACTAGCAACCCGTGGTCTGCCTCTTCGTATATTTATGATTGGAACACTCACTGGATCTCAATGGCTCATTTATGATTCATTCAAAGTTGCTGTTGGCCTGCCAACTACCGGTGGTGCTGCTCCTGCCACTACTACTACTCTTGCTTCCGATTCTACATCTCAGAGGGCAATAGAAGTTGCTTGA 1104 0.4855 MAVSVSDRSSHSSSSLIPSFLYSSSSSSLSSLSSGSSGQNFMIGSPKEPSGRRIEMFSPAYYAACTVGGALCCGLTHTAVTPLDLVKCNMQIDPVKYKSVSSGFGVLYREQGLRGFFRGWAPTLLGYHAQGAFKYGLYEYFKKYYSDLAGPEFATKYKTLIYLAGSASSESIAGLALCPFEAVKVRVQTQPGFARGLSDGLPKLVRAEGVSGLYKGLVPLWGRQIPYTMMKFASYENTVEMIYKHMIPTTKEESSKMVQLGVSFAGGYIAGILCALVSHPADNLVSFLNNSKGATVADAVNRLGLWGLATRGLPLRIFMIGTLTGSQWLIYDSFKVAVGLPTTGGAAPATTTTLASDSTSQRAIEVA* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2549 367 Pfam Mitochondrial carrier protein 160 245 IPR018108 -
Ahy20g2549 367 Pfam Mitochondrial carrier protein 62 146 IPR018108 -
Ahy20g2549 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 60 144 IPR018108 -
Ahy20g2549 367 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 15 350 IPR044677 GO:0005315|GO:1990547
Ahy20g2549 367 SUPERFAMILY Mitochondrial carrier 61 332 IPR023395 -
Ahy20g2549 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 157 241 IPR018108 -
Ahy20g2549 367 PANTHER PHOSPHATE CARRIER PROTEIN 15 350 - -
Ahy20g2549 367 Gene3D Mitochondrial carrier domain 156 339 IPR023395 -
Ahy20g2549 367 Gene3D Mitochondrial carrier domain 13 155 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2549 Ahy-Chr20 134002877 134007088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2549 10 350 Chloroplast and Mitochondria Gene Families AT3G48850 71.508 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2549 K15102 - vvi:100261124 508.834